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adapt for spaces/fields is broken #2091

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haakon-e opened this issue Nov 21, 2024 · 1 comment
Open

adapt for spaces/fields is broken #2091

haakon-e opened this issue Nov 21, 2024 · 1 comment
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bug Something isn't working

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@haakon-e
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haakon-e commented Nov 21, 2024

Describe the bug

adapting a (center)space leads to malformed struct, which is realized during printing of resulting object.

As a consequence, the space cannot be used to set up a field correctly.

error message
julia> Fields.Adapt.adapt(array_type, center_space)
CenterExtrudedFiniteDifferenceSpace:
  context: Error showing value of type ClimaCore.Spaces.ExtrudedFiniteDifferenceSpace{ClimaCore.Grids.DeviceExtrudedFiniteDifferenceGrid{ClimaCore.Topologies.DeviceIntervalTopology{@NamedTuple{bottom::Int64, top::Int64}}, ClimaCore.Quadratures.GLL{4}, ClimaCore.Geometry.CartesianGlobalGeometry, ClimaCore.DataLayouts.VIJFH{ClimaCore.Geometry.LocalGeometry{(1, 2, 3), ClimaCore.Geometry.XYZPoint{Float64}, Float64, StaticArraysCore.SMatrix{3, 3, Float64, 9}}, 82, 4, CUDA.CuArray{Float64, 5, CUDA.DeviceMemory}}, ClimaCore.DataLayouts.VIJFH{ClimaCore.Geometry.LocalGeometry{(1, 2, 3), ClimaCore.Geometry.XYZPoint{Float64}, Float64, StaticArraysCore.SMatrix{3, 3, Float64, 9}}, 83, 4, CUDA.CuArray{Float64, 5, CUDA.DeviceMemory}}}, ClimaCore.Grids.CellCenter}:
ERROR: type DeviceExtrudedFiniteDifferenceGrid has no field horizontal_grid
Stacktrace:
  [1] getproperty
    @ ./Base.jl:37 [inlined]
  [2] horizontal_space(full_space::ClimaCore.Spaces.ExtrudedFiniteDifferenceSpace{…})
    @ ClimaCore.Spaces ~/.julia/packages/ClimaCore/rSpyb/src/Spaces/extruded.jl:151
  [3] show(io::IOContext{…}, space::ClimaCore.Spaces.ExtrudedFiniteDifferenceSpace{…})
    @ ClimaCore.Spaces ~/.julia/packages/ClimaCore/rSpyb/src/Spaces/extruded.jl:136
  [4] show(io::IOContext{…}, ::MIME{…}, x::ClimaCore.Spaces.ExtrudedFiniteDifferenceSpace{…})
    @ Base.Multimedia ./multimedia.jl:47
  [5] (::OhMyREPL.var"#7#8"{REPL.REPLDisplay{}, MIME{}, Base.RefValue{}})(io::IOContext{Base.TTY})
    @ OhMyREPL ~/.julia/packages/OhMyREPL/bkUhZ/src/output_prompt_overwrite.jl:23
  [6] with_repl_linfo(f::Any, repl::REPL.LineEditREPL)
    @ REPL /clima/software/julia/julia-1.10.5/share/julia/stdlib/v1.10/REPL/src/REPL.jl:569
  [7] display
    @ ~/.julia/packages/OhMyREPL/bkUhZ/src/output_prompt_overwrite.jl:6 [inlined]
  [8] display
    @ /clima/software/julia/julia-1.10.5/share/julia/stdlib/v1.10/REPL/src/REPL.jl:278 [inlined]
  [9] display(x::Any)
    @ Base.Multimedia ./multimedia.jl:340
 [10] #invokelatest#2
    @ ./essentials.jl:892 [inlined]
 [11] invokelatest
    @ ./essentials.jl:889 [inlined]
 [12] print_response(errio::IO, response::Any, show_value::Bool, have_color::Bool, specialdisplay::Union{…})
    @ REPL /clima/software/julia/julia-1.10.5/share/julia/stdlib/v1.10/REPL/src/REPL.jl:315
 [13] (::REPL.var"#57#58"{REPL.LineEditREPL, Pair{Any, Bool}, Bool, Bool})(io::Any)
    @ REPL /clima/software/julia/julia-1.10.5/share/julia/stdlib/v1.10/REPL/src/REPL.jl:284
 [14] with_repl_linfo(f::Any, repl::REPL.LineEditREPL)
    @ REPL /clima/software/julia/julia-1.10.5/share/julia/stdlib/v1.10/REPL/src/REPL.jl:569
 [15] print_response(repl::REPL.AbstractREPL, response::Any, show_value::Bool, have_color::Bool)
    @ REPL /clima/software/julia/julia-1.10.5/share/julia/stdlib/v1.10/REPL/src/REPL.jl:282
 [16] (::REPL.var"#do_respond#80"{})(s::REPL.LineEdit.MIState, buf::Any, ok::Bool)
    @ REPL /clima/software/julia/julia-1.10.5/share/julia/stdlib/v1.10/REPL/src/REPL.jl:911
 [17] #invokelatest#2
    @ ./essentials.jl:892 [inlined]
 [18] invokelatest
    @ ./essentials.jl:889 [inlined]
 [19] run_interface(terminal::REPL.Terminals.TextTerminal, m::REPL.LineEdit.ModalInterface, s::REPL.LineEdit.MIState)
    @ REPL.LineEdit /clima/software/julia/julia-1.10.5/share/julia/stdlib/v1.10/REPL/src/LineEdit.jl:2656
 [20] run_frontend(repl::REPL.LineEditREPL, backend::REPL.REPLBackendRef)
    @ REPL /clima/software/julia/julia-1.10.5/share/julia/stdlib/v1.10/REPL/src/REPL.jl:1312
 [21] (::REPL.var"#62#68"{REPL.LineEditREPL, REPL.REPLBackendRef})()
    @ REPL /clima/software/julia/julia-1.10.5/share/julia/stdlib/v1.10/REPL/src/REPL.jl:386
Some type information was truncated. Use `show(err)` to see complete types.

To Reproduce

  1. allocate GPU on clima cluster: srun -G1 --pty bash -l
  2. in ClimaAtmos.jl root (main branch, julia v1.10): julia --proj=examples
  3. Run these julia commands:
import CUDA
import ClimaComms
import ClimaAtmos.InitialConditions as ICs
import ClimaAtmos as CA
import ClimaCore: ClimaCore, Fields
import YAML
comms_ctx = ClimaComms.SingletonCommsContext(ClimaComms.CUDADevice())
ClimaComms.init(comms_ctx)
config_dict = YAML.load_file("config/model_configs/diagnostic_edmfx_trmm_box.yml")
config = CA.AtmosConfig(config_dict; job_id="TRMM", comms_ctx)
# simulation_init = CA.get_simulation(config)  # fails due to `KernelError: passing and using non-bitstype argument`

## dig into `get_simulation`:
params = CA.create_parameter_set(config)
spaces = CA.get_spaces(config.parsed_args, params, config.comms_ctx)
center_space = spaces.center_space;
array_type = ClimaComms.array_type(ClimaComms.device(center_space))

# adapting a grid works: gpu -> cpu -> gpu
grid = ClimaCore.Spaces.grid(center_space);
Fields.Adapt.adapt(array_type, Fields.Adapt.adapt(Array, grid))

# space breaks (for display in REPL):
Fields.Adapt.adapt(array_type, center_space)
# ERROR: type DeviceExtrudedFiniteDifferenceGrid has no field horizontal_grid
# similarly:
Fields.Adapt.adapt(Array, center_space) # breaks with same error

System details

Any relevant system information:

  • Julia version v1.10
  • operating system clima cluster
  • modules loaded on cluster (module list): climacommon/2024_10_08
@haakon-e haakon-e added the bug Something isn't working label Nov 21, 2024
@haakon-e
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haakon-e commented Nov 21, 2024

Note: Calling CA.get_simulation(config) on this config will fail due to non-bitstype issues. If we can fix the issue described above, I hope to update ClimaAtmos.jl to construct the local state on CPU then adapt to GPU. This would not be needed if we actually fix interpolation on GPU, but that seems to be more challenging to achieve.

The atmos_state function in ClimaAtmos.jl/src/initial_conditions/atmos_state.jl would be updated to something like:

import ClimaComms

# [...]

function atmos_state(local_state, atmos_model, center_space, face_space)
    array_type = ClimaComms.array_type(ClimaComms.device(center_space))
    cpu_center_space = Fields.Adapt.adapt(Array, center_space)
    cpu_c = atmos_center_variables.(
        local_state.(Fields.local_geometry_field(cpu_center_space)),
        atmos_model,
    )
    c = Fields.Adapt.adapt(array_type, cpu_c)

    cpu_face_space = Fields.Adapt.adapt(Array, face_space)
    cpu_f = atmos_face_variables.(
        local_state.(Fields.local_geometry_field(cpu_face_space)),
        atmos_model,
    )
    f = Fields.Adapt.adapt(array_type, cpu_f)

    Fields.FieldVector(;
        c, f,
        atmos_surface_field(
            Fields.level(face_space, Fields.half),
            atmos_model.surface_model,
        )...,
    )
end

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