Minimum on a field does not return the correct value on GPU #2097

ph-kev · 2024-12-10T01:03:28Z

Describe the bug

Sometimes, minimum on a field does not return the correct value on GPU. It depends on the size of the field. For the MWE, it fails when it is size 129 = 2^7 + 1.

To Reproduce

The value should be 1.0 and not 0.0.

using ClimaComms
ClimaComms.@import_required_backends
using Logging

import ClimaCore:
    Domains,
    Meshes,
    Operators,
    Spaces,
    Quadratures,
    Topologies

FT = Float64
context = ClimaComms.context()
ClimaComms.init(context)

logger_stream = ClimaComms.iamroot(context) ? stderr : devnull
prev_logger = global_logger(ConsoleLogger(logger_stream, Logging.Info))
# Set up discretization
ne = 129
Nq = 4
ndof = ne * ne * 6 * Nq * Nq
@info "Configuration" device = context.device nprocs =
    ClimaComms.nprocs(context) Ne = ne Nq = Nq ndof = ndof FT = FT
R = FT(6.37122e6) # radius of earth
domain = Domains.SphereDomain(R)
mesh = Meshes.EquiangularCubedSphere(domain, ne)
quad = Quadratures.GLL{Nq}()
grid_topology = Topologies.Topology2D(context, mesh)
space = Spaces.SpectralElementSpace2D(grid_topology, quad)
min_val = minimum(ones(space))

Or even better, add it as a unit test, and open pull request.

Project

If not using the `examples` project:

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System details

Any relevant system information:

Julia version

Julia Version 1.11.2
Commit 5e9a32e7af2 (2024-12-01 20:02 UTC)
Build Info:
  Official https://julialang.org/ release
Platform Info:
  OS: Linux (x86_64-linux-gnu)
  CPU: 16 × AMD Ryzen 7 PRO 6850H with Radeon Graphics
  WORD_SIZE: 64
  LLVM: libLLVM-16.0.6 (ORCJIT, znver3)
Threads: 1 default, 0 interactive, 1 GC (on 16 virtual cores)

operating system

Ubuntu noble 24.04 x86_64

modules loaded on cluster (module list)
I did not ran this on the cluster

Related issues / PRs

ClimaCoupler issue: surface_fraction error with 2 GPUs ClimaCoupler.jl#687
ClimaAtmos issue: extrema gives different results on Fields vs parent arrays ClimaAtmos.jl#2993

The text was updated successfully, but these errors were encountered:

Sbozzolo · 2024-12-11T00:24:18Z

@ph-kev and I investigated this and found that the CUDA reduction has a problem:
https://github.com/CliMA/ClimaCore.jl/blame/340603b306e5fa54a1fe6db5bdfff6b5e2aadfb5/ext/cuda/data_layouts_mapreduce.jl#L41-L47

The algorithm splits all the points into threads and blocks, with each block computing 7 points. The way this is done, however, leads to the last block having fewer than nthreads.

We can see this in this line:

nblocks = cld(nitems, effective_blksize)

For the case in the first message, nitems = 1597536, nitems/2048 = 780.046875, and the algorithm picks nblock = 781. However, the last block has several threads that don't work on any point. So, the reduction shared array is not fully updated and when reducing we see our init value (0). This also explains why the bug is only in the minimum, because the maximum is always greater than the init, so the incorrect values are not propaged (for positive quantities).

ph-kev added the bug Something isn't working label Dec 10, 2024

ph-kev mentioned this issue Dec 10, 2024

surface_fraction error with 2 GPUs CliMA/ClimaCoupler.jl#687

Open

Sbozzolo added the Correctness ✏️ label Dec 16, 2024

Sbozzolo linked a pull request Dec 18, 2024 that will close this issue

Fix correctness in cuda_mapreduce #2106

Open

Sbozzolo self-assigned this Dec 18, 2024

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Minimum on a field does not return the correct value on GPU #2097

Minimum on a field does not return the correct value on GPU #2097

ph-kev commented Dec 10, 2024 •

edited

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Sbozzolo commented Dec 11, 2024

Minimum on a field does not return the correct value on GPU #2097

Minimum on a field does not return the correct value on GPU #2097

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ph-kev commented Dec 10, 2024 • edited Loading

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Sbozzolo commented Dec 11, 2024

ph-kev commented Dec 10, 2024 •

edited

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