From 6f5fc17fae8d6b43d279d18b660be22cafa79c25 Mon Sep 17 00:00:00 2001 From: rcruces Date: Wed, 9 Aug 2023 00:18:29 -0400 Subject: [PATCH] Updated conditional statement for fastsurfer container --- functions/01_proc-surf.sh | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/functions/01_proc-surf.sh b/functions/01_proc-surf.sh index b6d4b4c8..c35c9a49 100755 --- a/functions/01_proc-surf.sh +++ b/functions/01_proc-surf.sh @@ -130,7 +130,7 @@ elif [[ "$surfdir" == "FALSE" ]]; then ((N++)) Note "PROC" "$PROC" if [[ "$recon" == "fastsurfer" ]]; then Do_cmd mkdir -p "${dir_surf}/${idBIDS}" - if [[ ${PROC} == "container_micapipe-v0.2.0" ]]; then + if [[ ${PROC} == "container_micapipe-v0.2.2" ]]; then Info "FastSurfer: running fastsurfer_cpu environment" source activate fastsurfer_cpu Note "conda" "$(conda info --env | grep '*' | awk -F '*' '{print $2}')"