copy_data.yaml

name: copy data for maintenance

on:
  workflow_dispatch:

jobs:
  copy-files-to-rsv-data-repo:
    runs-on: ubuntu-latest
    steps:
      - name: Checkout
        uses: actions/checkout@v2
        with:
          fetch-depth: 2

      - name: Checkout and push to another repository
        uses: actions/checkout@v2
        with:
          #repository: kjsato/rsv-forecast-hub_data
          repository: HopkinsIDD/rsv-forecast-hub_data
          token: ${{ secrets.KJ3_PATC }}
          path: ./rsv-forecast-hub_data
          fetch-depth: 2
          ref: main

      - name: Copy new files
        run: |
          for FILE in model-output/**/* model-metadata/*; do
            if [ -f "$FILE" ]; then
              mkdir -p ./rsv-forecast-hub_data/$(dirname $FILE)
              cp $FILE ./rsv-forecast-hub_data/$FILE
            fi
          done
          
      - name: Commit and push new files
        run: |
          cd ./rsv-forecast-hub_data
          git config user.name "github-actions[bot]"
          git config user.email "41898282+github-actions[bot]@users.noreply.github.com"
          if [ -n "$(git status --porcelain)" ]; then
            git add .
            git commit -m "Upload new files to RSV data repo"
            git push
            echo "RSV data uploaded";
          else
            echo "no upload";
          fi
        shell: bash