DESCRIPTION

Package: faust
Title: Full Annotation Using Shape-constrained Trees
Version: 0.5.5
Authors@R: c(person("Evan", "Greene", email = "egreene@fredhutch.org", role = c("aut", "cre")),
   	   person("Laurie", "Davies", role = c("ctb")),	       
	   person("J.R.M.", "Hosking", role=c("ctb")),
	   person("Arne", "Kovac", role = c("ctb")),   
	   person("Martin", "Maechler", role = c("ctb")),
	   person("Joe", "Song", role = c("ctb")),
	   person("Haizhou", "Wang", role = c("ctb")),
	   person("Greg", "Finak", role = c("ctb","rev")))
Author: Evan Greene [aut, cre]
Maintainer: Evan Greene <egreene@fredhutch.org>
Description: FAUST implements the cytometry analysis method Full Annotation Using Shape-constrained Trees.
    FAUST builds on the work of many others.
    Its source contains modified files (conveyances) from the following R packages:
    "Ckmeans.1d.dp", by Joe Song and Haizhou Wang;
    "diptest" by Martin Maechler;
    "ftnonpar" by Laurie Davies and Arne Kovac.
    It also contains ports of functions from those packages.
    In addition, it ports a function from: "lmom" by J. R. M. Hosking.
Imports:
    scamp,
    Biobase,
    flowCore,
    flowWorkspace,
    tidyr,
    utils,
    grDevices,
    stats,
    ggplot2,
    dplyr,
    whisker,
    data.table,
    viridis,
    cowplot,
    ggridges,
    fdrtool,
    Rcpp,
    uwot,
    bit
VignetteBuilder: knitr
LinkingTo: Rcpp    
Depends: R (>= 3.6.0)
License: GPL (>= 3) + file LICENSE
Encoding: UTF-8
LazyData: true
Roxygen: list(markdown = TRUE)
RoxygenNote: 7.1.1
URL: https://github.com/FredHutch/faust
BugReports: https://github.com/FredHutch/faust/issues
SystemRequirements: C++11
Suggests:
    parallel,
    BiocManager,
    testthat,
    knitr,
    mvtnorm,
    MASS,
    rmarkdown,
    lme4,
    multcomp