pyproject.toml

[project]
name = "btpytools"
authors = [{name="Rob Campbell"}]
description="Helper functions for BakingTray and StitchIt"
readme="README.md"
requires-python = ">=3.9.0"
dynamic = ["version"]
license = {text = "GPL-3.0-or-later"} # Can also provide a link with file =  (the standard licences have abbreviations)
keywords = ["anatomy","image analysis","data handling"]
classifiers=[
    "Natural Language :: English",
    "Topic :: Scientific/Engineering :: Image Processing",
    "License :: Free for non-commercial use",
    "Programming Language :: Python :: 3.9",
    "Programming Language :: Python :: 3.10",
    "Intended Audience :: Developers",
    "Intended Audience :: Science/Research"
    ]
dependencies = [
    "pyyaml",
     "types-PyYAML",
     "termcolor"
    ]


[project.urls]
repository = "https://github.com/SWC-Advanced-Microscopy/btpytools"

[build-system]
requires = [
    "setuptools>=45",
    "wheel",
    "setuptools_scm[toml]>=6.2",
]

build-backend = "setuptools.build_meta"

[tool.setuptools_scm]


# github actions will look in these. these are the tools that we need to work with
# the software but not tools that are needed to run it.
[project.optional-dependencies]
dev = [
    "brainreg",
    "ipython",
    "mypy",
    "pytest",
    "setuptools_scm",
    "black",
    "flake8",
    "pre-commit"
]
register = [
    "brainreg"
    ]



[tool.black]
target-version = ['py39', 'py310']
skip-string-normalization = false
line-length = 85
exclude = '''
(
  /(
      \.eggs
    | \.git
    | \.hg
    | \.mypy_cache
    | _build
    | build
    | dist
  )/
)
'''

[tool.mypy]
#Crude way of not getting errors due to brainreg not being imported. Nothing else works
ignore_missing_imports = true



# Finally we define the "entry points" or "console scripts"
[project.scripts]
summariseAcqs="btpytools.summariseAcquisitions:main"
compressRawData="btpytools.compressRawData:main"
transferToServer="btpytools.transferToServer:main"
brainregbt="btpytools.brainreg_bt:main"