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pyproject.toml
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pyproject.toml
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[project]
name = "morphapi"
authors = [{ name = "Federico Claudi", email = "[email protected]" }]
description = "A lightweight python package to download neuronal morphologies"
readme = "README.md"
requires-python = ">=3.10"
dynamic = ["version"]
dependencies = [
"brainglobe-atlasapi >=2.0.1",
"brainglobe-space >=1.0.0",
"imagecodecs; python_version>='3.9'",
"neurom>=3",
"numpy",
"morphio>=3.4.0",
"pandas",
"pyyaml>=5.3",
"requests",
"retry",
"rich",
"vedo>=2023.5.0",
"vtk",
]
license = { text = "MIT" }
classifiers = [
"Development Status :: 2 - Pre-Alpha",
"Programming Language :: Python",
"Programming Language :: Python :: 3",
"Programming Language :: Python :: 3.10",
"Programming Language :: Python :: 3.11",
"Programming Language :: Python :: 3.12",
"Operating System :: OS Independent",
"License :: OSI Approved :: MIT License",
]
[project.urls]
"Homepage" = "https://github.com/brainglobe/morphapi"
"Bug Tracker" = "https://github.com/brainglobe/morphapi/issues"
"Documentation" = "https://github.com/brainglobe/morphapi"
"Source Code" = "https://github.com/brainglobe/morphapi"
"User Support" = "https://github.com/brainglobe/morphapi/issues"
[project.optional-dependencies]
dev = [
"pytest",
"pytest-cov",
"coverage",
"tox",
"black",
"mypy",
"pre-commit",
"ruff",
"setuptools_scm",
"pytest-sugar",
]
nb = ["jupyter", "k3d"]
[build-system]
requires = ["setuptools>=45", "wheel", "setuptools_scm[toml]>=6.2"]
build-backend = "setuptools.build_meta"
[tool.setuptools]
include-package-data = true
[tool.setuptools.packages.find]
include = ["morphapi*"]
exclude = ["tests*", "examples*"]
[tool.pytest.ini_options]
addopts = "--cov=morphapi"
[tool.black]
target-version = ['py310','py311', 'py312']
skip-string-normalization = false
line-length = 79
[tool.setuptools_scm]
[tool.check-manifest]
ignore = [
".yaml",
"tox.ini",
"tests/",
"tests/test_unit/",
"tests/test_integration/",
]
[tool.ruff]
line-length = 79
exclude = ["__init__.py", "build", ".eggs"]
fix = true
[tool.ruff.lint]
select = ["I", "E", "F"]
[tool.tox]
legacy_tox_ini = """
[tox]
envlist = py{310,311,312}
isolated_build = True
[gh-actions]
python =
3.10: py310
3.11: py311
3.12: py312
[testenv]
extras =
dev
commands =
pytest -v --color=yes --cov=morphapi --cov-report=xml
"""