diff --git a/Makefile b/Makefile index 6076fdb..c41c4ad 100644 --- a/Makefile +++ b/Makefile @@ -1,5 +1,5 @@ PKG_NAME := R-NMF -URL = https://cran.r-project.org/src/contrib/NMF_0.23.0.tar.gz +URL = https://cran.r-project.org/src/contrib/NMF_0.21.0.tar.gz ARCHIVES = include ../common/Makefile.common diff --git a/R-NMF.spec b/R-NMF.spec index e350737..89b18a2 100644 --- a/R-NMF.spec +++ b/R-NMF.spec @@ -3,14 +3,14 @@ # Generated by: autospec.py # Name : R-NMF -Version : 0.23.0 -Release : 38 -URL : https://cran.r-project.org/src/contrib/NMF_0.23.0.tar.gz -Source0 : https://cran.r-project.org/src/contrib/NMF_0.23.0.tar.gz +Version : 0.21.0 +Release : 39 +URL : https://cran.r-project.org/src/contrib/NMF_0.21.0.tar.gz +Source0 : https://cran.r-project.org/src/contrib/NMF_0.21.0.tar.gz Summary : Algorithms and Framework for Nonnegative Matrix Factorization Group : Development/Tools License : GPL-2.0+ -Requires: R-BiocManager +Requires: R-NMF-lib = %{version}-%{release} Requires: R-RColorBrewer Requires: R-colorspace Requires: R-digest @@ -23,7 +23,6 @@ Requires: R-registry Requires: R-reshape2 Requires: R-rngtools Requires: R-stringr -BuildRequires : R-BiocManager BuildRequires : R-RColorBrewer BuildRequires : R-colorspace BuildRequires : R-digest @@ -45,6 +44,14 @@ Factorization (NMF). The package implements a set of already published algorithm in C++, and the main interface function provides an easy way of performing parallel computations on multicore machines. +%package lib +Summary: lib components for the R-NMF package. +Group: Libraries + +%description lib +lib components for the R-NMF package. + + %prep %setup -q -c -n NMF cd %{_builddir}/NMF @@ -54,10 +61,10 @@ export http_proxy=http://127.0.0.1:9/ export https_proxy=http://127.0.0.1:9/ export no_proxy=localhost,127.0.0.1,0.0.0.0 export LANG=C.UTF-8 -export SOURCE_DATE_EPOCH=1636041953 +export SOURCE_DATE_EPOCH=1646087848 %install -export SOURCE_DATE_EPOCH=1636041953 +export SOURCE_DATE_EPOCH=1646087848 rm -rf %{buildroot} export LANG=C.UTF-8 export CFLAGS="$CFLAGS -O3 -flto -fno-semantic-interposition " @@ -98,3 +105,48 @@ R CMD check --no-manual --no-examples --no-codoc NMF || : %files %defattr(-,root,root,-) +/usr/lib64/R/library/NMF/CITATION +/usr/lib64/R/library/NMF/DESCRIPTION +/usr/lib64/R/library/NMF/INDEX +/usr/lib64/R/library/NMF/Meta/Rd.rds +/usr/lib64/R/library/NMF/Meta/data.rds +/usr/lib64/R/library/NMF/Meta/demo.rds +/usr/lib64/R/library/NMF/Meta/features.rds +/usr/lib64/R/library/NMF/Meta/hsearch.rds +/usr/lib64/R/library/NMF/Meta/links.rds +/usr/lib64/R/library/NMF/Meta/nsInfo.rds +/usr/lib64/R/library/NMF/Meta/package.rds +/usr/lib64/R/library/NMF/Meta/vignette.rds +/usr/lib64/R/library/NMF/NAMESPACE +/usr/lib64/R/library/NMF/NEWS +/usr/lib64/R/library/NMF/R/NMF +/usr/lib64/R/library/NMF/R/NMF.rdb +/usr/lib64/R/library/NMF/R/NMF.rdx +/usr/lib64/R/library/NMF/REFERENCES.bib +/usr/lib64/R/library/NMF/data/esGolub.rda +/usr/lib64/R/library/NMF/demo/aheatmap.R +/usr/lib64/R/library/NMF/demo/heatmaps.R +/usr/lib64/R/library/NMF/demo/nmf.R +/usr/lib64/R/library/NMF/doc/NMF-vignette.R +/usr/lib64/R/library/NMF/doc/NMF-vignette.Rnw +/usr/lib64/R/library/NMF/doc/NMF-vignette.pdf +/usr/lib64/R/library/NMF/doc/consensus.pdf +/usr/lib64/R/library/NMF/doc/heatmaps.R +/usr/lib64/R/library/NMF/doc/heatmaps.Rnw +/usr/lib64/R/library/NMF/doc/heatmaps.pdf +/usr/lib64/R/library/NMF/doc/index.html +/usr/lib64/R/library/NMF/help/AnIndex +/usr/lib64/R/library/NMF/help/NMF.rdb +/usr/lib64/R/library/NMF/help/NMF.rdx +/usr/lib64/R/library/NMF/help/aliases.rds +/usr/lib64/R/library/NMF/help/paths.rds +/usr/lib64/R/library/NMF/html/00Index.html +/usr/lib64/R/library/NMF/html/R.css +/usr/lib64/R/library/NMF/scripts/grid.R +/usr/lib64/R/library/NMF/scripts/report.Rmd + +%files lib +%defattr(-,root,root,-) +/usr/lib64/R/library/NMF/libs/NMF.so +/usr/lib64/R/library/NMF/libs/NMF.so.avx2 +/usr/lib64/R/library/NMF/libs/NMF.so.avx512 diff --git a/options.conf b/options.conf index 59ff646..7898924 100644 --- a/options.conf +++ b/options.conf @@ -1,6 +1,6 @@ [package] name = R-NMF -url = https://cran.r-project.org/src/contrib/NMF_0.23.0.tar.gz +url = https://cran.r-project.org/src/contrib/NMF_0.21.0.tar.gz archives = giturl = domain = diff --git a/release b/release index e522732..a272009 100644 --- a/release +++ b/release @@ -1 +1 @@ -38 +39 diff --git a/testresults b/testresults index 92c6b06..8581a68 100644 --- a/testresults +++ b/testresults @@ -1,5 +1,5 @@ -Total : 0 -Pass : 0 -Fail : 0 -Skip : 0 +Total : 50 +Pass : 43 +Fail : 5 +Skip : 2 XFail : 0 diff --git a/upstream b/upstream index 41e65a4..b4b1c1f 100644 --- a/upstream +++ b/upstream @@ -1 +1 @@ -6caadce58f7d99a4aa66cf7d756842e8d76d18f5/NMF_0.23.0.tar.gz +a4fab48e8d7d3dec8f02e9d286351b5170aa3e14/NMF_0.21.0.tar.gz diff --git a/versions b/versions index ca222b7..8854156 100644 --- a/versions +++ b/versions @@ -1 +1 @@ -0.23.0 +0.21.0