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Update gorule-0000027.md
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Found additional implementation points while looking at pombase/pombase-chado#1224 ; updating.
Tagging @mugitty @pgaudet
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kltm authored Sep 26, 2024
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Expand Up @@ -8,7 +8,7 @@ status: implemented
contact: "[email protected]"
implementations:
- language: python
source: https://github.com/biolink/ontobio/blob/master/ontobio/io/gafparser.py
source: https://github.com/biolink/ontobio/blob/master/ontobio/io/gafparser.py https://github.com/biolink/ontobio/blob/master/ontobio/io/assocparser.py
---
- DB (GAF and GPAD column 1); and all DB abbreviations in 'with' field (GAF column 8; GPAD column 7) and in the annotation extensions (GAF column 16; GPAD column 11) must be in [db-xrefs.yaml](https://github.com/geneontology/go-site/blob/master/metadata/db-xrefs.yaml) (see below)
- id_syntax information in the [db-xrefs.yaml](https://github.com/geneontology/go-site/blob/master/metadata/db-xrefs.yaml) file can be used to validate local identifiers.
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