From 63aaafcdb5c9aa1a5a399cbe178b0e6c3542243a Mon Sep 17 00:00:00 2001 From: pgaudet Date: Tue, 26 Sep 2023 16:13:20 +0200 Subject: [PATCH 1/2] Update gorule-0000059.md Implemented --- metadata/rules/gorule-0000059.md | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/metadata/rules/gorule-0000059.md b/metadata/rules/gorule-0000059.md index bfd44efe..fe09c0ff 100644 --- a/metadata/rules/gorule-0000059.md +++ b/metadata/rules/gorule-0000059.md @@ -4,7 +4,7 @@ id: GORULE:0000059 title: "GAF Version 2.0 and 2.1 are converted into GAF Version 2.2" type: repair fail_mode: soft -status: proposed +status: implemented tags: [] contact: "go-quality@lists.stanford.edu" --- From e966c6f2103b469b0813188e4c59076c3a75e57e Mon Sep 17 00:00:00 2001 From: pgaudet Date: Tue, 26 Sep 2023 14:13:39 +0000 Subject: [PATCH 2/2] refreshing goref and rules README.md files --- metadata/rules/README.md | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/metadata/rules/README.md b/metadata/rules/README.md index 05f8e098..37fc966a 100644 --- a/metadata/rules/README.md +++ b/metadata/rules/README.md @@ -1031,7 +1031,7 @@ the above file, that element should be dropped from the extensions. ## GAF Version 2.0 and 2.1 are converted into GAF Version 2.2 * id: [GORULE:0000059](https://github.com/geneontology/go-site/blob/master/metadata/rules/gorule-0000059.md) - * status: proposed + * status: implemented In GAF2.2, a gp2term relation (column 4; see https://wiki.geneontology.org/Annotation_Relations#Gene_Product_to_GO_term_Relations_(%22qualifiers%22)) is mandatory for every annotation.