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30 Open 52 Closed
30 Open 52 Closed
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Issues list

add additional species names to gene labels bug
#116 opened Apr 30, 2023 by balhoff
@balhoff @kltm
7
Ecoli data is gone from NEO as the upstream source changed bug (B: affects usability)
#114 opened Mar 2, 2023 by kltm
@kltm
13
In some cases bad identifiers are getting into the load
#112 opened Jan 13, 2023 by kltm
5
Some e.coli entries not found
#111 opened Aug 25, 2022 by pgaudet
18
unresolved IDs
#106 opened Jun 30, 2022 by tmushayahama
1
@balhoff
10
Clarify and implement rules on inclusion of RNA gene products / RNA central
#99 opened May 6, 2022 by cmungall
4
Isoform display in label (originally on the visual tool)
#102 opened May 6, 2022 by pmasson55
4
Many ChEBI chemicals not available for metabolic models
#96 opened May 6, 2022 by marcfeuermann
17
NEO GOlr / Solr load does not use "modern" loader, so does not build all closures for "modern" AmiGO bug
#92 opened Apr 20, 2022 by kltm
Some Reactome Identifiers are not resolving bug
#91 opened Apr 15, 2022 by ukemi
@balhoff @kltm
11
Add some minimal QC to the NEO pipeline enhancement
#89 opened Apr 7, 2022 by kltm
14
Use ROBOT instead of owltools in NEO build
#84 opened Feb 23, 2022 by kltm
1
ChEBI : limit load to ChEBI that have 'UniProt' synonyms enhancement
#78 opened Jan 27, 2022 by pgaudet
10
Include Alliance automated gene descriptions as 'definitions' for gene entries enhancement
#75 opened Oct 11, 2021 by vanaukenk
3
consider updating wormbase expansion
#61 opened Nov 30, 2020 by balhoff
3
Remove NEO build dependency on frozen datasets.json bug
#58 opened Apr 8, 2020 by kltm
1
Identify test cases for NEO (and autocomplete) builds enhancement help wanted
#54 opened Mar 13, 2020 by kltm
1 task
1
NEO may be flooded with uninteresting tRNA ids/labels from GOA bug question
#46 opened Sep 27, 2019 by kltm
1
Include life stage ontologies in neo
#41 opened Aug 8, 2019 by vanaukenk
2
Please use http://purl.uniprot.org/uniprot or http://purl.uniprot.org/isoform/ IRIs for UniProt concepts
#34 opened Oct 22, 2018 by JervenBolleman
28
Metadata on Gene Product
#31 opened Aug 3, 2018 by lpalbou
Fold neo into main pipeline
#21 opened Aug 23, 2017 by cmungall
1
NEO script fails if case is different for "name" (column 3 in gaf)
#18 opened May 30, 2017 by elserj
Get non-mouse PRO ids into Noctua for use in annotation bug (B: affects usability)
#105 opened May 12, 2017 by hdrabkin
@cmungall
11
NEO term URIs are different from Golr
#17 opened Mar 13, 2017 by balhoff
@dougli1sqrd
10
ProTip! no:milestone will show everything without a milestone.