pom.xml

<project xmlns="http://maven.apache.org/POM/4.0.0" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
	xsi:schemaLocation="http://maven.apache.org/POM/4.0.0 http://maven.apache.org/xsd/maven-4.0.0.xsd">
	<modelVersion>4.0.0</modelVersion>
	<groupId>org.bbop</groupId>
	<artifactId>touchup</artifactId>
	<version>0.0.1-SNAPSHOT</version>
	<build>
		<sourceDirectory>src</sourceDirectory>
		<resources>
			<resource>
				<directory>resources</directory>
			</resource>
		</resources>
		<plugins>
			<plugin>
				<artifactId>maven-compiler-plugin</artifactId>
				<version>3.1</version>
				<configuration>
					<source>1.7</source>
					<target>1.7</target>
				</configuration>
			</plugin>
			<plugin>
				<groupId>org.apache.maven.plugins</groupId>
				<artifactId>maven-assembly-plugin</artifactId>
				<configuration>
					<finalName>touchup-all</finalName>
					<appendAssemblyId>false</appendAssemblyId>
					<attach>false</attach>
					<outputDirectory>${project.basedir}/bin</outputDirectory>
					<descriptors>
						<descriptor>touchup-all.xml</descriptor>
					</descriptors>
					<archive>
						<manifest>
							<addDefaultImplementationEntries>true</addDefaultImplementationEntries>
							<mainClass>org.bbop.phylo.touchup.Touchup</mainClass>
						</manifest>
						<manifestEntries>
							<owltools-build-timestamp>${maven.build.timestamp}</owltools-build-timestamp>
						</manifestEntries>
					</archive>
				</configuration>
				<executions>
					<execution>
						<id>make-assembly</id>
						<phase>package</phase>
						<goals>
							<goal>single</goal>
						</goals>
					</execution>
				</executions>
			</plugin>
		</plugins>
	</build>
	<repositories>
		<repository>
			<id>BerkeleyBOP</id>
			<name>Berkeley  BOP  maven  repository</name>
			<url>http://code.berkeleybop.org/maven/repository/</url>
			<snapshots>
				<enabled>true</enabled>
			</snapshots>
		</repository>
	</repositories>
	<dependencies>
		<dependency>
			<groupId>org.yaml</groupId>
			<artifactId>snakeyaml</artifactId>
			<version>1.16</version>
		</dependency>
		<dependency>
			<groupId>org.bbop</groupId>
			<artifactId>golr-client</artifactId>
			<version>0.2.2-SNAPSHOT</version>
		</dependency>
		<dependency>
			<groupId>log4j</groupId>
			<artifactId>log4j</artifactId>
			<version>1.2.14</version>
		</dependency>
	</dependencies>
</project>