diff --git a/dependencies.xml b/dependencies.xml
index 3b4ba4c0c2..d1a93e8532 100644
--- a/dependencies.xml
+++ b/dependencies.xml
@@ -13,6 +13,7 @@ Note all install methods after "main" take
add with no pinned version:
remove a library: remove
action for limited OS: ...
+ action for certain machine ...
add library from forge: ...
optional: ...
skip run/install check: ...
@@ -42,12 +43,12 @@ Note all install methods after "main" take
2023
- 1.5
+ 1.6
3.5
0.13
2.2
- 2.10
- 2.10
+ 2.13
+
3.8
3
@@ -64,13 +65,11 @@ Note all install methods after "main" take
- 2.2
- 1.13
- 1
+ 2.6
2.22
-
+
1.1
diff --git a/ravenframework/Optimizers/Factory.py b/ravenframework/Optimizers/Factory.py
index 7eefb5c52d..6362c727b7 100644
--- a/ravenframework/Optimizers/Factory.py
+++ b/ravenframework/Optimizers/Factory.py
@@ -24,10 +24,14 @@
from .GradientDescent import GradientDescent
from .SimulatedAnnealing import SimulatedAnnealing
from .GeneticAlgorithm import GeneticAlgorithm
-from .BayesianOptimizer import BayesianOptimizer
factory = EntityFactory('Optimizer')
factory.registerType('GradientDescent', GradientDescent)
factory.registerType('SimulatedAnnealing', SimulatedAnnealing)
factory.registerType('GeneticAlgorithm', GeneticAlgorithm)
-factory.registerType('BayesianOptimizer', BayesianOptimizer)
+
+try:
+ from .BayesianOptimizer import BayesianOptimizer
+ factory.registerType('BayesianOptimizer', BayesianOptimizer)
+except ModuleNotFoundError as error:
+ print("ERROR: Unable to import BayesianOptimizer", error)
diff --git a/ravenframework/Optimizers/__init__.py b/ravenframework/Optimizers/__init__.py
index 8822fd0a25..dc5a8c80a1 100644
--- a/ravenframework/Optimizers/__init__.py
+++ b/ravenframework/Optimizers/__init__.py
@@ -24,6 +24,9 @@
from .RavenSampled import RavenSampled
from .GradientDescent import GradientDescent
from .SimulatedAnnealing import SimulatedAnnealing
-from .BayesianOptimizer import BayesianOptimizer
+try:
+ from .BayesianOptimizer import BayesianOptimizer
+except ModuleNotFoundError as error:
+ print("ERROR: Unable to import BayesianOptimizer", error)
from .Factory import factory
diff --git a/ravenframework/SupervisedLearning/KerasBase.py b/ravenframework/SupervisedLearning/KerasBase.py
index 5d0617afd3..5b03970e60 100644
--- a/ravenframework/SupervisedLearning/KerasBase.py
+++ b/ravenframework/SupervisedLearning/KerasBase.py
@@ -1910,7 +1910,9 @@ def __init__(self):
# continues learning even when many updates have been done.
self.availOptimizer['adadelta'] = tf.keras.optimizers.Adadelta
# Adam optimzer
- self.availOptimizer['adam'] = tf.keras.optimizers.Adam
+ self.availOptimizer['adam_new'] = tf.keras.optimizers.Adam
+ # Adam legacy optimizer
+ self.availOptimizer['adam'] = tf.keras.optimizers.legacy.Adam
# Adamax optimizer from Adam paper's section 7
self.availOptimizer['adamax'] = tf.keras.optimizers.Adamax
# Nesterov Adam optimizer
diff --git a/scripts/library_handler.py b/scripts/library_handler.py
index 05a95423c3..97640de567 100644
--- a/scripts/library_handler.py
+++ b/scripts/library_handler.py
@@ -449,6 +449,14 @@ def _readLibNode(libNode, config, toRemove, opSys, addOptional, limitSources, re
# if this library's OS's don't match the requested OS, then we move on
if opSys not in [x.lower().strip() for x in libOS.split(',')]:
return # nothing to do
+ libMachine = libNode.attrib.get('machine', None)
+ if libMachine is not None:
+ machineType = platform.machine()
+ machineSubst = {'AMD64':'x86_64'} #substitutions for different names
+ if machineType in machineSubst:
+ machineType = machineSubst[machineType] #convert to standard name.
+ if machineType not in [x.lower().strip() for x in libMachine.split(',')]:
+ return # nothing to do since not machine type specified
# check optional
## note that None means "not optional" in this case
## further note anything besides "True" is taken to mean "not optional"
diff --git a/tests/framework/CodeInterfaceTests/CobraTF/tests b/tests/framework/CodeInterfaceTests/CobraTF/tests
index 6d26c8196d..07f8a9caf8 100644
--- a/tests/framework/CodeInterfaceTests/CobraTF/tests
+++ b/tests/framework/CodeInterfaceTests/CobraTF/tests
@@ -19,8 +19,13 @@
[./test3]
type = 'RavenFramework'
input = 'test3_cobratf_code_interface.xml'
- text = 'CobraTFinterfaceTest3/testDummyStep_MC/1/sample.inp CobraTFinterfaceTest3/testDummyStep_MC/1/vuq_param.txt CobraTFinterfaceTest3/testDummyStep_MC/2/sample.inp CobraTFinterfaceTest3/testDummyStep_MC/2/vuq_param.txt'
+ text = 'CobraTFinterfaceTest3/testDummyStep_MC/1/sample.inp CobraTFinterfaceTest3/testDummyStep_MC/2/sample.inp'
csv = 'CobraTFinterfaceTest3/cobra_out.csv'
+ [./text]
+ type = NumericText
+ output = ' CobraTFinterfaceTest3/testDummyStep_MC/1/vuq_param.txt CobraTFinterfaceTest3/testDummyStep_MC/2/vuq_param.txt'
+ rel_err = 1e-8
+ [../]
test_interface_only = True
[../]
diff --git a/tests/framework/Optimizers/BayesianOptimizer/tests b/tests/framework/Optimizers/BayesianOptimizer/tests
index d7240f58f2..6c5bde176d 100644
--- a/tests/framework/Optimizers/BayesianOptimizer/tests
+++ b/tests/framework/Optimizers/BayesianOptimizer/tests
@@ -3,6 +3,7 @@
type = 'RavenFramework'
input = 'Basic/BayesianBasic.xml'
skip_if_OS = 'linux'
+ required_libraries = 'smt'
[./data]
type = OrderedCSV
output = 'Basic/opt_export_0.csv'
@@ -17,6 +18,7 @@
type = 'RavenFramework'
input = 'Basic/BayesianBasic.xml'
skip_if_OS = 'mac,windows'
+ required_libraries = 'smt'
[./data]
type = OrderedCSV
output = 'Basic/final_opt.csv'
@@ -29,6 +31,7 @@
type = 'RavenFramework'
input = 'MishraBirdConstrained/BayesianMishraBirdConstrained.xml'
skip_if_OS = 'linux'
+ required_libraries = 'smt'
[./data]
type = OrderedCSV
output = 'MishraBirdConstrained/opt_export_0.csv'
@@ -43,6 +46,7 @@
type = 'RavenFramework'
input = 'MishraBirdConstrained/BayesianMishraBirdConstrained.xml'
skip_if_OS = 'mac,windows'
+ required_libraries = 'smt'
[./data]
type = OrderedCSV
output = 'MishraBirdConstrained/final_opt.csv'
@@ -55,6 +59,7 @@
type = 'RavenFramework'
input = 'Matyas/BayesianMatyas.xml'
skip_if_OS = 'linux'
+ required_libraries = 'smt'
[./data]
type = OrderedCSV
output = 'Matyas/opt_export_0.csv'
@@ -69,6 +74,7 @@
type = 'RavenFramework'
input = 'Matyas/BayesianMatyas.xml'
skip_if_OS = 'mac,windows'
+ required_libraries = 'smt'
[./data]
type = OrderedCSV
output = 'Matyas/final_opt.csv'
diff --git a/tests/framework/PostProcessors/LimitSurface/tests b/tests/framework/PostProcessors/LimitSurface/tests
index ebd064fb1c..ed29f7d8d4 100644
--- a/tests/framework/PostProcessors/LimitSurface/tests
+++ b/tests/framework/PostProcessors/LimitSurface/tests
@@ -39,6 +39,7 @@
output = 'limitSurfaceBoundingError/LimitSurfaceWeightedPb_dump.csv'
windows_gold = 'limitSurfaceBoundingError/WindowsLimitSurfaceWeightedPb_dump.csv'
mac_gold = 'limitSurfaceBoundingError/MacLimitSurfaceWeightedPb_dump.csv'
+ rel_err = 0.002
[../]
[../]
diff --git a/tests/framework/Samplers/SparseGrid/tests b/tests/framework/Samplers/SparseGrid/tests
index 920842dc28..c7f87d600b 100644
--- a/tests/framework/Samplers/SparseGrid/tests
+++ b/tests/framework/Samplers/SparseGrid/tests
@@ -62,6 +62,7 @@
input = 'test_scgpc_normal.xml'
UnorderedXml = 'scgpc/Ndumprom.xml'
csv = 'scgpc/Ndump.csv'
+ zero_threshold = 1e-12
[../]
[./gamma]
type = 'RavenFramework'
@@ -96,6 +97,7 @@
input = 'test_scgpc_triang.xml'
UnorderedXml = 'scgpc/Tdumprom.xml'
csv = 'scgpc/Tdump.csv'
+ zero_threshold = 1e-12
[../]
[./exponential]
type = 'RavenFramework'
diff --git a/tests/framework/pca_adaptive_sgc/gold/Adaptive/dump.xml b/tests/framework/pca_adaptive_sgc/gold/Adaptive/dump.xml
index eb862d6176..9a9bbe44ca 100644
--- a/tests/framework/pca_adaptive_sgc/gold/Adaptive/dump.xml
+++ b/tests/framework/pca_adaptive_sgc/gold/Adaptive/dump.xml
@@ -2,6 +2,8 @@
GAUSSgpcROM
+ y1,y2
+ ans,ans2
1.434
diff --git a/tests/framework/pca_adaptive_sgc/tests b/tests/framework/pca_adaptive_sgc/tests
index 1378d63c91..db9dcf1fa9 100644
--- a/tests/framework/pca_adaptive_sgc/tests
+++ b/tests/framework/pca_adaptive_sgc/tests
@@ -3,7 +3,7 @@
type = 'RavenFramework'
input = 'test_adaptive_sgc_pca_analytic.xml'
UnorderedCsv = 'Adaptive/data.csv'
- UnorderedXml = 'Adaptive/dump.xml'
+ xml = 'Adaptive/dump.xml'
zero_threshold = 1e-12
[../]
@@ -35,6 +35,7 @@
UnorderedCsv = 'polynomial/csv_database.csv'
UnorderedXml = 'polynomial/stats_td1.xml' #analytic, "Tensor Polynomial (First-Order) with Multivariate Normal Distribution"
max_time = 500 # windows test box is slow, so very slow
+ zero_threshold = 1e-12
[../]
[]
diff --git a/tests/framework/pca_sparseGridCollocation/tests b/tests/framework/pca_sparseGridCollocation/tests
index b10dd0921a..2366c268ea 100644
--- a/tests/framework/pca_sparseGridCollocation/tests
+++ b/tests/framework/pca_sparseGridCollocation/tests
@@ -35,6 +35,8 @@
input = 'test_poly_correlation.xml'
csv = 'polyCorrelation/csv_database.csv'
UnorderedXml = 'polyCorrelation/stats_td1.xml'
+ zero_threshold = 1e-12
+ rel_err = 1e-8
[../]
[./polyCorrelationMC]
diff --git a/tests/framework/tests b/tests/framework/tests
index ef382a3403..ede7c77c07 100644
--- a/tests/framework/tests
+++ b/tests/framework/tests
@@ -228,6 +228,7 @@
input = 'test_redundant_inputs.xml'
output = 'RedundantInputs/mc_out.xml RedundantInputs/grid_out.xml'
csv = 'RedundantInputs/mc_out.csv RedundantInputs/grid_out.csv'
+ rel_err = 2.0e-3
[../]
[./redundantInputsSCgPC]
type = 'RavenFramework'
@@ -262,6 +263,7 @@
type = 'RavenFramework'
input = 'test_simple_ND_grid_probabilityWeight_value.xml'
csv = 'NDGridPWvalue/testPrintPointSet_dump.csv'
+ rel_err = 1.0e-9
[../]
[./LHSVariables]