publish-book.yml

name: publish-book

on: 
  workflow_dispatch:

env:
  NB_KERNEL: python
  ORG: neuromatch
  NMA_REPO: nasa-open-science
  NMA_MAIN_BRANCH: main
  PREREQ_REPO: precourse
  PREREQ_INTRO: ComputationalNeuroscience

# This job installs dependencies, build the book, and pushes it to `gh-pages`
jobs:
  build-and-deploy-book:
    runs-on: ubuntu-latest
    steps:

      - name: Checkout
        uses: actions/checkout@v3
        with:
          persist-credentials: false
          fetch-depth: 0
          ref: ${{ github.head_ref }}

      - name: Get commit message
        run: |
          readonly local msg=$(git log -1 --pretty=format:"%s")
          echo "COMMIT_MESSAGE=$msg" >> $GITHUB_ENV

      - name: Set up Python
        uses: actions/setup-python@v4
        with:
          python-version: 3.9

      - name: Install CI tools
        run: |
          BRANCH=`python -c 'import os, re; m = re.search(r"nmaci:([\w-]+)", os.environ["COMMIT_MESSAGE"]); print("main" if m is None else m.group(1))'`
          # NOTE: might enventually change this back if we integrate changes
          wget https://github.com/$ORG/nmaci/archive/refs/heads/$BRANCH.tar.gz
          tar -xzf $BRANCH.tar.gz
          pip install --upgrade pip
          pip install -r nmaci-$BRANCH/requirements.txt
          mv nmaci-$BRANCH/scripts/ ci/
          rm -r nmaci-$BRANCH
          rm -r $BRANCH.tar.gz
          echo ci/ >> .gitignore

      - name: Install dependencies
        run: |
          pip install -r requirements.txt
          pip install jupyter-book==0.14.0 ghp-import
          pip install jupyter_client==7.3.5  # downgrade jupyter-client to fix hangs

      - name: Install XKCD fonts
        if: "!contains(env.COMMIT_MESSAGE, 'skip ci')"
        run: |
          sudo apt-get update -yq
          wget http://archive.ubuntu.com/ubuntu/pool/universe/f/fonts-humor-sans/fonts-humor-sans_1.0-4_all.deb
          sudo dpkg -i --force-all fonts-humor-sans_1.0-4_all.deb <<< 'yes'
          sudo apt install -fy
          rm -f $HOME/.matplotlib/fontList.cache

      # - name: Copy tutorials from precourse repo
      #   if: "!contains(env.COMMIT_MESSAGE, 'skip precourse')"
      #   run: |
      #     BRANCH=`python -c 'import os, re; m = re.search(r"precourse:([\w-]+)", os.environ["COMMIT_MESSAGE"]); print("main" if m is None else m.group(1))'`
      #     wget https://github.com/$ORG/$PREREQ_REPO/archive/refs/heads/$BRANCH.tar.gz
      #     tar -xzf $BRANCH.tar.gz
      #     mv precourse-$BRANCH/tutorials/W0D* tutorials/
      #     cat precourse-main/tutorials/materials.yml tutorials/materials.yml > out.yml
      #     mv out.yml tutorials/materials.yml
      #     mv precourse-$BRANCH/prereqs .
      #     rm -r precourse-$BRANCH
      #     rm -r $BRANCH.tar.gz

      - name: Build student book
        run: |
          python ci/generate_book.py student
          # convert _toc to new format
          jupyter-book toc migrate /home/runner/work/nasa-open-science/nasa-open-science/book/_toc.yml -o /home/runner/work/nasa-open-science/nasa-open-science/book/_toc.yml
          ln -s ../tutorials book/tutorials
          ln -s ../projects book/projects
          # ln -s ../prereqs book/prereqs
          jupyter-book build book
          python ci/parse_html_for_errors.py student

      - name: Commit book
        run: |
          git config --local user.email "action@github.com"
          git config --local user.name "GitHub Action"
          ghp-import -n -c "openscience.neuromatch.io" -m "Update course book" book/_build/html
          git checkout -f gh-pages

      - name: Publish to gh-pages
        uses: ad-m/github-push-action@v0.6.0
        with:
          github_token: ${{ secrets.GITHUB_TOKEN }}
          branch: gh-pages
          force: true