diff --git a/.github/workflows/tests+artifacts+pypi.yml b/.github/workflows/tests+artifacts+pypi.yml
index e4c000913..f4e3ba599 100644
--- a/.github/workflows/tests+artifacts+pypi.yml
+++ b/.github/workflows/tests+artifacts+pypi.yml
@@ -31,7 +31,7 @@ jobs:
run: git diff
nojit_and_codecov:
- needs: [precommit, pylint]
+ needs: [precommit, pylint, devops]
runs-on: ubuntu-latest
env:
NUMBA_DISABLE_JIT: 1
@@ -300,7 +300,7 @@ jobs:
with:
submodules: recursive
fetch-depth: 0 # https://github.com/pypa/setuptools_scm/issues/480
- - run: pip install -r tests/devops_tests/requirements.txt "flexparser<0.4"
+ - run: pip install -r tests/devops_tests/requirements.txt
- env:
GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}
run: pytest --durations=10 -v -s -We -p no:unraisableexception -k "not test_run_notebooks" tests/devops_tests
@@ -363,7 +363,7 @@ jobs:
publish:
runs-on: ubuntu-latest
- needs: [tests, examples, devops, package, pkg_install_check]
+ needs: [tests, examples, package, pkg_install_check]
permissions:
id-token: write
steps:
diff --git a/examples/PySDM_examples/Abade_and_Albuquerque_2024/fig_2.ipynb b/examples/PySDM_examples/Abade_and_Albuquerque_2024/fig_2.ipynb
index 88e11f4d2..32f569f69 100644
--- a/examples/PySDM_examples/Abade_and_Albuquerque_2024/fig_2.ipynb
+++ b/examples/PySDM_examples/Abade_and_Albuquerque_2024/fig_2.ipynb
@@ -5,7 +5,7 @@
"id": "a3af9f8e-a138-47c8-af08-62451db09352",
"metadata": {},
"source": [
- "[](https://github.com/open-atmos/PySDM/blob/main/examples/PySDM_examples/Abade_and_Albuquerque_2024/fig_2.ipynb)\n",
+ "[](https://github.com/open-atmos/PySDM/blob/main/examples/PySDM_examples/Abade_and_Albuquerque_2024/fig_2.ipynb)\n",
"[](https://mybinder.org/v2/gh/open-atmos/PySDM.git/main?urlpath=lab/tree/examples/PySDM_examples/Abade_and_Albuquerque_2024/fig_2.ipynb)\n",
"[](https://colab.research.google.com/github/open-atmos/PySDM/blob/main/examples/PySDM_examples/Abade_and_Albuquerque_2024/fig_2.ipynb)"
]
@@ -22,6 +22,20 @@
"https://doi.org/10.1002/qj.4775"
]
},
+ {
+ "metadata": {},
+ "cell_type": "code",
+ "outputs": [],
+ "execution_count": null,
+ "source": [
+ "import sys\n",
+ "if 'google.colab' in sys.modules:\n",
+ " !pip --quiet install open-atmos-jupyter-utils\n",
+ " from open_atmos_jupyter_utils import pip_install_on_colab\n",
+ " pip_install_on_colab('PySDM-examples')"
+ ],
+ "id": "aa876f2db21bb522"
+ },
{
"cell_type": "code",
"execution_count": 1,
diff --git a/examples/PySDM_examples/Abdul_Razzak_Ghan_2000/fig_4_kinetic_limitations.ipynb b/examples/PySDM_examples/Abdul_Razzak_Ghan_2000/fig_4_kinetic_limitations.ipynb
index 69d7e99de..407b2fb1c 100644
--- a/examples/PySDM_examples/Abdul_Razzak_Ghan_2000/fig_4_kinetic_limitations.ipynb
+++ b/examples/PySDM_examples/Abdul_Razzak_Ghan_2000/fig_4_kinetic_limitations.ipynb
@@ -3,7 +3,7 @@
{
"cell_type": "markdown",
"source": [
- "[](https://github.com/open-atmos/PySDM/blob/main/examples/PySDM_examples/Abdul_Razzak_Ghan_2000/fig_4_kinetic_limitations.ipynb)\n",
+ "[](https://github.com/open-atmos/PySDM/blob/main/examples/PySDM_examples/Abdul_Razzak_Ghan_2000/fig_4_kinetic_limitations.ipynb)\n",
"[](https://mybinder.org/v2/gh/open-atmos/PySDM.git/main?urlpath=lab/tree/examples/PySDM_examples/Abdul_Razzak_Ghan_2000/fig_4_kinetic_limitations.ipynb)\n",
"[](https://colab.research.google.com/github/open-atmos/PySDM/blob/main/examples/PySDM_examples/Abdul_Razzak_Ghan_2000/fig_4_kinetic_limitations.ipynb)"
],
@@ -24,6 +24,20 @@
"http://doi.wiley.com/10.1029/1999JD901161"
]
},
+ {
+ "metadata": {},
+ "cell_type": "code",
+ "outputs": [],
+ "execution_count": null,
+ "source": [
+ "import sys\n",
+ "if 'google.colab' in sys.modules:\n",
+ " !pip --quiet install open-atmos-jupyter-utils\n",
+ " from open_atmos_jupyter_utils import pip_install_on_colab\n",
+ " pip_install_on_colab('PySDM-examples')"
+ ],
+ "id": "f52cbd092d056ba6"
+ },
{
"cell_type": "code",
"execution_count": 4,
diff --git a/examples/PySDM_examples/Abdul_Razzak_Ghan_2000/figs1-5.ipynb b/examples/PySDM_examples/Abdul_Razzak_Ghan_2000/figs1-5.ipynb
index d43919d0c..1db6d9870 100644
--- a/examples/PySDM_examples/Abdul_Razzak_Ghan_2000/figs1-5.ipynb
+++ b/examples/PySDM_examples/Abdul_Razzak_Ghan_2000/figs1-5.ipynb
@@ -5,7 +5,7 @@
"id": "6a24a08f",
"metadata": {},
"source": [
- "[](https://github.com/open-atmos/PySDM/blob/main/examples/PySDM_examples/Abdul_Razzak_Ghan_2000/figs1-5.ipynb)\n",
+ "[](https://github.com/open-atmos/PySDM/blob/main/examples/PySDM_examples/Abdul_Razzak_Ghan_2000/figs1-5.ipynb)\n",
"[](https://mybinder.org/v2/gh/open-atmos/PySDM.git/main?urlpath=lab/tree/examples/PySDM_examples/Abdul_Razzak_Ghan_2000/figs1-5.ipynb)\n",
"[](https://colab.research.google.com/github/open-atmos/PySDM/blob/main/examples/PySDM_examples/Abdul_Razzak_Ghan_2000/figs1-5.ipynb)"
]
diff --git a/examples/PySDM_examples/Alpert_and_Knopf_2016/fig_1.ipynb b/examples/PySDM_examples/Alpert_and_Knopf_2016/fig_1.ipynb
index a9173d40c..0ca02faf7 100644
--- a/examples/PySDM_examples/Alpert_and_Knopf_2016/fig_1.ipynb
+++ b/examples/PySDM_examples/Alpert_and_Knopf_2016/fig_1.ipynb
@@ -4,7 +4,7 @@
"cell_type": "markdown",
"metadata": {},
"source": [
- "[](https://github.com/open-atmos/PySDM/blob/main/examples/PySDM_examples/Alpert_and_Knopf_2016/fig_1.ipynb)\n",
+ "[](https://github.com/open-atmos/PySDM/blob/main/examples/PySDM_examples/Alpert_and_Knopf_2016/fig_1.ipynb)\n",
"[](https://mybinder.org/v2/gh/open-atmos/PySDM.git/main?urlpath=lab/tree/examples/PySDM_examples/Alpert_and_Knopf_2016/fig_1.ipynb)\n",
"[](https://colab.research.google.com/github/open-atmos/PySDM/blob/main/examples/PySDM_examples/Alpert_and_Knopf_2016/fig_1.ipynb)\n"
]
@@ -35,7 +35,7 @@
"if 'google.colab' in sys.modules:\n",
" !pip --quiet install open-atmos-jupyter-utils\n",
" from open_atmos_jupyter_utils import pip_install_on_colab\n",
- " pip_install_on_colab('PySDM-examples>=1.9', 'PySDM>=1.9')"
+ " pip_install_on_colab('PySDM-examples')"
]
},
{
diff --git a/examples/PySDM_examples/Alpert_and_Knopf_2016/fig_2.ipynb b/examples/PySDM_examples/Alpert_and_Knopf_2016/fig_2.ipynb
index 4ec01a6f4..f331adab2 100644
--- a/examples/PySDM_examples/Alpert_and_Knopf_2016/fig_2.ipynb
+++ b/examples/PySDM_examples/Alpert_and_Knopf_2016/fig_2.ipynb
@@ -9,7 +9,7 @@
}
},
"source": [
- "[](https://github.com/open-atmos/PySDM/blob/main/examples/PySDM_examples/Alpert_and_Knopf_2016/fig_2.ipynb)\n",
+ "[](https://github.com/open-atmos/PySDM/blob/main/examples/PySDM_examples/Alpert_and_Knopf_2016/fig_2.ipynb)\n",
"[](https://mybinder.org/v2/gh/open-atmos/PySDM.git/main?urlpath=lab/tree/examples/PySDM_examples/Alpert_and_Knopf_2016/fig_2.ipynb)\n",
"[](https://colab.research.google.com/github/open-atmos/PySDM/blob/main/examples/PySDM_examples/Alpert_and_Knopf_2016/fig_2.ipynb)"
]
@@ -40,7 +40,7 @@
"if 'google.colab' in sys.modules:\n",
" !pip --quiet install open-atmos-jupyter-utils\n",
" from open_atmos_jupyter_utils import pip_install_on_colab\n",
- " pip_install_on_colab('PySDM-examples>=1.9', 'PySDM>=1.9')"
+ " pip_install_on_colab('PySDM-examples')"
]
},
{
diff --git a/examples/PySDM_examples/Alpert_and_Knopf_2016/fig_3.ipynb b/examples/PySDM_examples/Alpert_and_Knopf_2016/fig_3.ipynb
index f3655d295..6a173ad44 100644
--- a/examples/PySDM_examples/Alpert_and_Knopf_2016/fig_3.ipynb
+++ b/examples/PySDM_examples/Alpert_and_Knopf_2016/fig_3.ipynb
@@ -4,7 +4,7 @@
"cell_type": "markdown",
"metadata": {},
"source": [
- "[](https://github.com/open-atmos/PySDM/blob/main/examples/PySDM_examples/Alpert_and_Knopf_2016/fig_3.ipynb)\n",
+ "[](https://github.com/open-atmos/PySDM/blob/main/examples/PySDM_examples/Alpert_and_Knopf_2016/fig_3.ipynb)\n",
"[](https://mybinder.org/v2/gh/open-atmos/PySDM.git/main?urlpath=lab/tree/examples/PySDM_examples/Alpert_and_Knopf_2016/fig_3.ipynb)\n",
"[](https://colab.research.google.com/github/open-atmos/PySDM/blob/main/examples/PySDM_examples/Alpert_and_Knopf_2016/fig_3.ipynb)"
]
@@ -35,7 +35,7 @@
"if 'google.colab' in sys.modules:\n",
" !pip --quiet install open-atmos-jupyter-utils\n",
" from open_atmos_jupyter_utils import pip_install_on_colab\n",
- " pip_install_on_colab('PySDM-examples>=1.9', 'PySDM>=1.9')"
+ " pip_install_on_colab('PySDM-examples')"
]
},
{
diff --git a/examples/PySDM_examples/Alpert_and_Knopf_2016/fig_4.ipynb b/examples/PySDM_examples/Alpert_and_Knopf_2016/fig_4.ipynb
index e92ab9101..4cd85fbaf 100644
--- a/examples/PySDM_examples/Alpert_and_Knopf_2016/fig_4.ipynb
+++ b/examples/PySDM_examples/Alpert_and_Knopf_2016/fig_4.ipynb
@@ -4,7 +4,7 @@
"cell_type": "markdown",
"metadata": {},
"source": [
- "[](https://github.com/open-atmos/PySDM/blob/main/examples/PySDM_examples/Alpert_and_Knopf_2016/fig_4.ipynb)\n",
+ "[](https://github.com/open-atmos/PySDM/blob/main/examples/PySDM_examples/Alpert_and_Knopf_2016/fig_4.ipynb)\n",
"[](https://mybinder.org/v2/gh/open-atmos/PySDM.git/main?urlpath=lab/tree/examples/PySDM_examples/Alpert_and_Knopf_2016/fig_4.ipynb)\n",
"[](https://colab.research.google.com/github/open-atmos/PySDM/blob/main/examples/PySDM_examples/Alpert_and_Knopf_2016/fig_4.ipynb)"
]
@@ -35,7 +35,7 @@
"if 'google.colab' in sys.modules:\n",
" !pip --quiet install open-atmos-jupyter-utils\n",
" from open_atmos_jupyter_utils import pip_install_on_colab\n",
- " pip_install_on_colab('PySDM-examples>=1.14', 'PySDM>=1.14')"
+ " pip_install_on_colab('PySDM-examples')"
]
},
{
diff --git a/examples/PySDM_examples/Alpert_and_Knopf_2016/fig_5.ipynb b/examples/PySDM_examples/Alpert_and_Knopf_2016/fig_5.ipynb
index b7a4aad1e..bc1482977 100644
--- a/examples/PySDM_examples/Alpert_and_Knopf_2016/fig_5.ipynb
+++ b/examples/PySDM_examples/Alpert_and_Knopf_2016/fig_5.ipynb
@@ -4,7 +4,7 @@
"cell_type": "markdown",
"metadata": {},
"source": [
- "[](https://github.com/open-atmos/PySDM/blob/main/examples/PySDM_examples/Alpert_and_Knopf_2016/fig_5.ipynb)\n",
+ "[](https://github.com/open-atmos/PySDM/blob/main/examples/PySDM_examples/Alpert_and_Knopf_2016/fig_5.ipynb)\n",
"[](https://mybinder.org/v2/gh/open-atmos/PySDM.git/main?urlpath=lab/tree/examples/PySDM_examples/Alpert_and_Knopf_2016/fig_5.ipynb)\n",
"[](https://colab.research.google.com/github/open-atmos/PySDM/blob/main/examples/PySDM_examples/Alpert_and_Knopf_2016/fig_5.ipynb)"
]
@@ -35,7 +35,7 @@
"if 'google.colab' in sys.modules:\n",
" !pip --quiet install open-atmos-jupyter-utils\n",
" from open_atmos_jupyter_utils import pip_install_on_colab\n",
- " pip_install_on_colab('PySDM-examples>=1.14', 'PySDM>=1.14')"
+ " pip_install_on_colab('PySDM-examples')"
]
},
{
diff --git a/examples/PySDM_examples/Arabas_and_Shima_2017/fig_5.ipynb b/examples/PySDM_examples/Arabas_and_Shima_2017/fig_5.ipynb
index 60b1d0672..16cc3c52b 100644
--- a/examples/PySDM_examples/Arabas_and_Shima_2017/fig_5.ipynb
+++ b/examples/PySDM_examples/Arabas_and_Shima_2017/fig_5.ipynb
@@ -4,7 +4,7 @@
"cell_type": "markdown",
"metadata": {},
"source": [
- "[](https://github.com/open-atmos/PySDM/blob/main/examples/PySDM_examples/Arabas_and_Shima_2017/fig_5.ipynb)\n",
+ "[](https://github.com/open-atmos/PySDM/blob/main/examples/PySDM_examples/Arabas_and_Shima_2017/fig_5.ipynb) \n",
"[](https://mybinder.org/v2/gh/open-atmos/PySDM.git/main?urlpath=lab/tree/examples/PySDM_examples/Arabas_and_Shima_2017/fig_5.ipynb) \n",
"[](https://colab.research.google.com/github/open-atmos/PySDM/blob/main/examples/PySDM_examples/Arabas_and_Shima_2017/fig_5.ipynb)"
]
diff --git a/examples/PySDM_examples/Arabas_et_al_2015/gui.ipynb b/examples/PySDM_examples/Arabas_et_al_2015/gui.ipynb
index fd08e2df7..e8d18a536 100644
--- a/examples/PySDM_examples/Arabas_et_al_2015/gui.ipynb
+++ b/examples/PySDM_examples/Arabas_et_al_2015/gui.ipynb
@@ -4,7 +4,7 @@
"cell_type": "markdown",
"metadata": {},
"source": [
- "[](https://github.com/open-atmos/PySDM/blob/main/examples/PySDM_examples/Arabas_et_al_2015/gui.ipynb)\n",
+ "[](https://github.com/open-atmos/PySDM/blob/main/examples/PySDM_examples/Arabas_et_al_2015/gui.ipynb)\n",
"[](https://mybinder.org/v2/gh/open-atmos/PySDM.git/main?urlpath=lab/tree/examples/PySDM_examples/Arabas_et_al_2015/gui.ipynb)\n",
"[](https://colab.research.google.com/github/open-atmos/PySDM/blob/main/examples/PySDM_examples/Arabas_et_al_2015/gui.ipynb)"
]
diff --git a/examples/PySDM_examples/Arabas_et_al_2015/paraview_hello_world.ipynb b/examples/PySDM_examples/Arabas_et_al_2015/paraview_hello_world.ipynb
index 695f8dfbd..ff290e2c1 100644
--- a/examples/PySDM_examples/Arabas_et_al_2015/paraview_hello_world.ipynb
+++ b/examples/PySDM_examples/Arabas_et_al_2015/paraview_hello_world.ipynb
@@ -1,5 +1,35 @@
{
"cells": [
+ {
+ "metadata": {},
+ "cell_type": "markdown",
+ "source": [
+ "[](https://github.com/open-atmos/PySDM/blob/main/examples/PySDM_examples/Arabas_et_al_2015/paraview_hello_world.ipynb)\n",
+ "[](https://mybinder.org/v2/gh/open-atmos/PySDM.git/main?urlpath=lab/tree/examples/PySDM_examples/Arabas_et_al_2015/paraview_hello_world.ipynb)\n",
+ "[](https://colab.research.google.com/github/open-atmos/PySDM/blob/main/examples/PySDM_examples/Arabas_et_al_2015/paraview_hello_world.ipynb)"
+ ],
+ "id": "a491199946368a38"
+ },
+ {
+ "metadata": {},
+ "cell_type": "markdown",
+ "source": "# TODO #1417",
+ "id": "35dba30bf42bd326"
+ },
+ {
+ "metadata": {},
+ "cell_type": "code",
+ "outputs": [],
+ "execution_count": null,
+ "source": [
+ "import sys\n",
+ "if 'google.colab' in sys.modules:\n",
+ " !pip --quiet install open-atmos-jupyter-utils\n",
+ " from open_atmos_jupyter_utils import pip_install_on_colab\n",
+ " pip_install_on_colab('PySDM-examples')"
+ ],
+ "id": "93289adf665b5c7f"
+ },
{
"cell_type": "code",
"execution_count": null,
diff --git a/examples/PySDM_examples/Arabas_et_al_2023/aida.ipynb b/examples/PySDM_examples/Arabas_et_al_2023/aida.ipynb
index 371f13721..8461a996b 100644
--- a/examples/PySDM_examples/Arabas_et_al_2023/aida.ipynb
+++ b/examples/PySDM_examples/Arabas_et_al_2023/aida.ipynb
@@ -9,7 +9,7 @@
}
},
"source": [
- "[](https://github.com/open-atmos/PySDM/blob/main/examples/PySDM_examples/Arabas_et_al_2023/aida.ipynb)\n",
+ "[](https://github.com/open-atmos/PySDM/blob/main/examples/PySDM_examples/Arabas_et_al_2023/aida.ipynb)\n",
"[](https://mybinder.org/v2/gh/open-atmos/PySDM.git/main?urlpath=lab/tree/examples/PySDM_examples/Arabas_et_al_2023/aida.ipynb)\n",
"[](https://colab.research.google.com/github/open-atmos/PySDM/blob/main/examples/PySDM_examples/Arabas_et_al_2023/aida.ipynb)"
]
@@ -21,6 +21,19 @@
"inspired by Fig. 2 in [Steinke et al. 2011](https://doi.org/10.5194/acp-11-12945-2011) (\"Ice nucleation properties of fine ash particles from the Eyjafjallajokull eruption in April 2010\")"
]
},
+ {
+ "metadata": {},
+ "cell_type": "code",
+ "outputs": [],
+ "execution_count": null,
+ "source": [
+ "import sys\n",
+ "if 'google.colab' in sys.modules:\n",
+ " !pip --quiet install open-atmos-jupyter-utils\n",
+ " from open_atmos_jupyter_utils import pip_install_on_colab\n",
+ " pip_install_on_colab('PySDM-examples')"
+ ]
+ },
{
"cell_type": "markdown",
"metadata": {},
diff --git a/examples/PySDM_examples/Arabas_et_al_2023/copula_hello.ipynb b/examples/PySDM_examples/Arabas_et_al_2023/copula_hello.ipynb
index f14f9388c..db07aba6b 100644
--- a/examples/PySDM_examples/Arabas_et_al_2023/copula_hello.ipynb
+++ b/examples/PySDM_examples/Arabas_et_al_2023/copula_hello.ipynb
@@ -1,5 +1,35 @@
{
"cells": [
+ {
+ "metadata": {},
+ "cell_type": "markdown",
+ "source": [
+ "[](https://github.com/open-atmos/PySDM/blob/main/examples/PySDM_examples/Arabas_et_al_2023/copula_hello.ipynb)\n",
+ "[](https://mybinder.org/v2/gh/open-atmos/PySDM.git/main?urlpath=lab/tree/examples/PySDM_examples/Arabas_et_al_2023/copula_hello.ipynb)\n",
+ "[](https://colab.research.google.com/github/open-atmos/PySDM/blob/main/examples/PySDM_examples/Arabas_et_al_2023/copula_hello.ipynb)"
+ ],
+ "id": "b17de2cda126ff4f"
+ },
+ {
+ "metadata": {},
+ "cell_type": "markdown",
+ "source": "# TODO #1417",
+ "id": "5aec9c0198c091d5"
+ },
+ {
+ "metadata": {},
+ "cell_type": "code",
+ "outputs": [],
+ "execution_count": null,
+ "source": [
+ "import sys\n",
+ "if 'google.colab' in sys.modules:\n",
+ " !pip --quiet install open-atmos-jupyter-utils\n",
+ " from open_atmos_jupyter_utils import pip_install_on_colab\n",
+ " pip_install_on_colab('PySDM-examples')"
+ ],
+ "id": "7301d14cf5b6ccfb"
+ },
{
"cell_type": "code",
"execution_count": null,
diff --git a/examples/PySDM_examples/Arabas_et_al_2023/fig_2.ipynb b/examples/PySDM_examples/Arabas_et_al_2023/fig_2.ipynb
index 46bcb3ed0..94daa06c2 100644
--- a/examples/PySDM_examples/Arabas_et_al_2023/fig_2.ipynb
+++ b/examples/PySDM_examples/Arabas_et_al_2023/fig_2.ipynb
@@ -10,11 +10,37 @@
}
},
"source": [
- "[](https://github.com/open-atmos/PySDM/blob/main/examples/PySDM_examples/Arabas_et_al_2023/fig_2.ipynb)\n",
+ "[](https://github.com/open-atmos/PySDM/blob/main/examples/PySDM_examples/Arabas_et_al_2023/fig_2.ipynb)\n",
"[](https://mybinder.org/v2/gh/open-atmos/PySDM.git/main?urlpath=lab/tree/examples/PySDM_examples/Arabas_et_al_2023/fig_2.ipynb)\n",
"[](https://colab.research.google.com/github/open-atmos/PySDM/blob/main/examples/PySDM_examples/Arabas_et_al_2023/fig_2.ipynb)"
]
},
+ {
+ "metadata": {},
+ "cell_type": "markdown",
+ "source": "TODO #1417 informations about this notebook",
+ "id": "f85560654c25e11f"
+ },
+ {
+ "metadata": {},
+ "cell_type": "code",
+ "outputs": [],
+ "execution_count": null,
+ "source": [
+ "import sys\n",
+ "if 'google.colab' in sys.modules:\n",
+ " !pip --quiet install open-atmos-jupyter-utils\n",
+ " from open_atmos_jupyter_utils import pip_install_on_colab\n",
+ " pip_install_on_colab('PySDM-examples')"
+ ],
+ "id": "71145f7dd95293ea"
+ },
+ {
+ "metadata": {},
+ "cell_type": "markdown",
+ "source": "",
+ "id": "cdd02eb3f498662c"
+ },
{
"cell_type": "code",
"execution_count": 1,
diff --git a/examples/PySDM_examples/Arabas_et_al_2023/fig_A2.ipynb b/examples/PySDM_examples/Arabas_et_al_2023/fig_A2.ipynb
index bd573c32a..32851bea0 100644
--- a/examples/PySDM_examples/Arabas_et_al_2023/fig_A2.ipynb
+++ b/examples/PySDM_examples/Arabas_et_al_2023/fig_A2.ipynb
@@ -5,11 +5,31 @@
"id": "1371df7e-3c6e-4bdd-91b7-49c20ebe33c5",
"metadata": {},
"source": [
- "[](https://github.com/open-atmos/PySDM/blob/main/examples/PySDM_examples/Arabas_et_al_2023/fig_A2.ipynb)\n",
+ "[](https://github.com/open-atmos/PySDM/blob/main/examples/PySDM_examples/Arabas_et_al_2023/fig_A2.ipynb)\n",
"[](https://mybinder.org/v2/gh/open-atmos/PySDM.git/main?urlpath=lab/tree/examples/PySDM_examples/Arabas_et_al_2023/fig_A2ipynb)\n",
"[](https://colab.research.google.com/github/open-atmos/PySDM/blob/main/examples/PySDM_examples/Arabas_et_al_2023/fig_A2.ipynb)"
]
},
+ {
+ "metadata": {},
+ "cell_type": "markdown",
+ "source": "# TODO #1417",
+ "id": "c6f48049ea08fe2e"
+ },
+ {
+ "metadata": {},
+ "cell_type": "code",
+ "outputs": [],
+ "execution_count": null,
+ "source": [
+ "import sys\n",
+ "if 'google.colab' in sys.modules:\n",
+ " !pip --quiet install open-atmos-jupyter-utils\n",
+ " from open_atmos_jupyter_utils import pip_install_on_colab\n",
+ " pip_install_on_colab('PySDM-examples')"
+ ],
+ "id": "dba473e974480091"
+ },
{
"cell_type": "code",
"execution_count": 1,
diff --git a/examples/PySDM_examples/Arabas_et_al_2023/figs_3_and_7_and_8.ipynb b/examples/PySDM_examples/Arabas_et_al_2023/figs_3_and_7_and_8.ipynb
index 4a61a9825..ec5bea35e 100644
--- a/examples/PySDM_examples/Arabas_et_al_2023/figs_3_and_7_and_8.ipynb
+++ b/examples/PySDM_examples/Arabas_et_al_2023/figs_3_and_7_and_8.ipynb
@@ -10,11 +10,31 @@
}
},
"source": [
- "[](https://github.com/open-atmos/PySDM/blob/main/examples/PySDM_examples/Arabas_et_al_2023/fig_3_and_7_and_8.ipynb)\n",
+ "[](https://github.com/open-atmos/PySDM/blob/main/examples/PySDM_examples/Arabas_et_al_2023/fig_3_and_7_and_8.ipynb)\n",
"[](https://mybinder.org/v2/gh/open-atmos/PySDM.git/main?urlpath=lab/tree/examples/PySDM_examples/Arabas_et_al_2023/fig_3_and_7_and_8.ipynb)\n",
"[](https://colab.research.google.com/github/open-atmos/PySDM/blob/main/examples/PySDM_examples/Arabas_et_al_2023/fig_3_and_7_and_8.ipynb)"
]
},
+ {
+ "metadata": {},
+ "cell_type": "markdown",
+ "source": "# TODO #1417",
+ "id": "99148d254fcace2f"
+ },
+ {
+ "metadata": {},
+ "cell_type": "code",
+ "outputs": [],
+ "execution_count": null,
+ "source": [
+ "import sys\n",
+ "if 'google.colab' in sys.modules:\n",
+ " !pip --quiet install open-atmos-jupyter-utils\n",
+ " from open_atmos_jupyter_utils import pip_install_on_colab\n",
+ " pip_install_on_colab('PySDM-examples')"
+ ],
+ "id": "a1ef1c9d72aa9b36"
+ },
{
"cell_type": "code",
"execution_count": 1,
diff --git a/examples/PySDM_examples/Arabas_et_al_2023/figs_5_and_6.ipynb b/examples/PySDM_examples/Arabas_et_al_2023/figs_5_and_6.ipynb
index 597deaf85..9ea993645 100644
--- a/examples/PySDM_examples/Arabas_et_al_2023/figs_5_and_6.ipynb
+++ b/examples/PySDM_examples/Arabas_et_al_2023/figs_5_and_6.ipynb
@@ -10,11 +10,31 @@
}
},
"source": [
- "[](https://github.com/open-atmos/PySDM/blob/main/examples/PySDM_examples/Arabas_et_al_2023/fig_5_and_6.ipynb)\n",
+ "[](https://github.com/open-atmos/PySDM/blob/main/examples/PySDM_examples/Arabas_et_al_2023/fig_5_and_6.ipynb)\n",
"[](https://mybinder.org/v2/gh/open-atmos/PySDM.git/main?urlpath=lab/tree/examples/PySDM_examples/Arabas_et_al_2023/fig_5_and_6.ipynb)\n",
"[](https://colab.research.google.com/github/open-atmos/PySDM/blob/main/examples/PySDM_examples/Arabas_et_al_2023/fig_5_and_6.ipynb)"
]
},
+ {
+ "metadata": {},
+ "cell_type": "markdown",
+ "source": "# TODO #1417",
+ "id": "bc1f274e9f347bca"
+ },
+ {
+ "metadata": {},
+ "cell_type": "code",
+ "outputs": [],
+ "execution_count": null,
+ "source": [
+ "import sys\n",
+ "if 'google.colab' in sys.modules:\n",
+ " !pip --quiet install open-atmos-jupyter-utils\n",
+ " from open_atmos_jupyter_utils import pip_install_on_colab\n",
+ " pip_install_on_colab('PySDM-examples')"
+ ],
+ "id": "b1ab25d00d401238"
+ },
{
"cell_type": "code",
"execution_count": 1,
diff --git a/examples/PySDM_examples/Bartman_et_al_2021/demo.ipynb b/examples/PySDM_examples/Bartman_et_al_2021/demo.ipynb
index 0f16e7b45..5947fe3e6 100644
--- a/examples/PySDM_examples/Bartman_et_al_2021/demo.ipynb
+++ b/examples/PySDM_examples/Bartman_et_al_2021/demo.ipynb
@@ -3,7 +3,7 @@
{
"cell_type": "markdown",
"source": [
- "[](https://github.com/open-atmos/PySDM/blob/main/examples/PySDM_examples/Bartman_et_al_2021/demo.ipynb)\n",
+ "[](https://github.com/open-atmos/PySDM/blob/main/examples/PySDM_examples/Bartman_et_al_2021/demo.ipynb)\n",
"[](https://mybinder.org/v2/gh/open-atmos/PySDM.git/main?urlpath=lab/tree/examples/PySDM_examples/Bartman_et_al_2021/demo.ipynb)\n",
"[](https://colab.research.google.com/github/open-atmos/PySDM/blob/main/examples/PySDM_examples/Bartman_et_al_2021/demo.ipynb)"
],
@@ -11,6 +11,11 @@
"collapsed": false
}
},
+ {
+ "metadata": {},
+ "cell_type": "markdown",
+ "source": "# TODO #1417"
+ },
{
"cell_type": "code",
"execution_count": 8,
diff --git a/examples/PySDM_examples/Bartman_et_al_2021/demo_fig2.ipynb b/examples/PySDM_examples/Bartman_et_al_2021/demo_fig2.ipynb
index 86502d132..52de33bf0 100644
--- a/examples/PySDM_examples/Bartman_et_al_2021/demo_fig2.ipynb
+++ b/examples/PySDM_examples/Bartman_et_al_2021/demo_fig2.ipynb
@@ -3,7 +3,7 @@
{
"cell_type": "markdown",
"source": [
- "[](https://github.com/open-atmos/PySDM/blob/main/examples/PySDM_examples/Bartman_et_al_2021/demo_fig2.ipynb)\n",
+ "[](https://github.com/open-atmos/PySDM/blob/main/examples/PySDM_examples/Bartman_et_al_2021/demo_fig2.ipynb)\n",
"[](https://mybinder.org/v2/gh/open-atmos/PySDM.git/main?urlpath=lab/tree/examples/PySDM_examples/Bartman_et_al_2021/demo_fig2.ipynb)\n",
"[](https://colab.research.google.com/github/open-atmos/PySDM/blob/main/examples/PySDM_examples/Bartman_et_al_2021/demo_fig2.ipynb)"
],
@@ -11,6 +11,11 @@
"collapsed": false
}
},
+ {
+ "metadata": {},
+ "cell_type": "markdown",
+ "source": "# TODO #1417"
+ },
{
"cell_type": "code",
"execution_count": 7,
diff --git a/examples/PySDM_examples/Bartman_et_al_2021/demo_fig3.ipynb b/examples/PySDM_examples/Bartman_et_al_2021/demo_fig3.ipynb
index 0e3576ba9..0581d09cc 100644
--- a/examples/PySDM_examples/Bartman_et_al_2021/demo_fig3.ipynb
+++ b/examples/PySDM_examples/Bartman_et_al_2021/demo_fig3.ipynb
@@ -3,7 +3,7 @@
{
"cell_type": "markdown",
"source": [
- "[](https://github.com/open-atmos/PySDM/blob/main/examples/PySDM_examples/Bartman_et_al_2021/demo_fig3.ipynb)\n",
+ "[](https://github.com/open-atmos/PySDM/blob/main/examples/PySDM_examples/Bartman_et_al_2021/demo_fig3.ipynb)\n",
"[](https://mybinder.org/v2/gh/open-atmos/PySDM.git/main?urlpath=lab/tree/examples/PySDM_examples/Bartman_et_al_2021/demo_fig3.ipynb)\n",
"[](https://colab.research.google.com/github/open-atmos/PySDM/blob/main/examples/PySDM_examples/Bartman_et_al_2021/demo_fig3.ipynb)"
],
@@ -11,6 +11,11 @@
"collapsed": false
}
},
+ {
+ "metadata": {},
+ "cell_type": "markdown",
+ "source": "# TODO #1417"
+ },
{
"cell_type": "code",
"execution_count": 8,
diff --git a/examples/PySDM_examples/Berry_1967/figs_5_8_10.ipynb b/examples/PySDM_examples/Berry_1967/figs_5_8_10.ipynb
index 790fc51fc..ac6333de1 100644
--- a/examples/PySDM_examples/Berry_1967/figs_5_8_10.ipynb
+++ b/examples/PySDM_examples/Berry_1967/figs_5_8_10.ipynb
@@ -4,7 +4,7 @@
"cell_type": "markdown",
"metadata": {},
"source": [
- "[](https://github.com/open-atmos/PySDM/blob/main/examples/PySDM_examples/Berry_1967/figs_5_8_10.ipynb)\n",
+ "[](https://github.com/open-atmos/PySDM/blob/main/examples/PySDM_examples/Berry_1967/figs_5_8_10.ipynb)\n",
"[](https://mybinder.org/v2/gh/open-atmos/PySDM.git/main?urlpath=lab/tree/examples/PySDM_examples/Berry_1967/figs_5_8_10.ipynb) \n",
"[](https://colab.research.google.com/github/open-atmos/PySDM/blob/main/examples/PySDM_examples/Berry_1967/figs_5_8_10.ipynb)"
]
diff --git a/examples/PySDM_examples/Bieli_et_al_2022/make_fig_3.ipynb b/examples/PySDM_examples/Bieli_et_al_2022/make_fig_3.ipynb
index 268bee73b..6bc3f39b2 100644
--- a/examples/PySDM_examples/Bieli_et_al_2022/make_fig_3.ipynb
+++ b/examples/PySDM_examples/Bieli_et_al_2022/make_fig_3.ipynb
@@ -4,19 +4,32 @@
"cell_type": "markdown",
"metadata": {},
"source": [
- "[](https://github.com/open-atmos/PySDM/blob/main/examples/PySDM_examples/Bieli_et_al_2022/make_fig_3.ipynb) \n",
+ "[](https://github.com/open-atmos/PySDM/blob/main/examples/PySDM_examples/Bieli_et_al_2022/make_fig_3.ipynb) \n",
"[](https://mybinder.org/v2/gh/open-atmos/PySDM.git/main?urlpath=lab/tree/examples/PySDM_examples/Bieli_et_al_2022/make_fig_3.ipynb) \n",
"[](https://colab.research.google.com/github/open-atmos/PySDM/blob/main/examples/PySDM_examples/Bieli_et_al_2022/make_fig_3.ipynb)"
]
},
{
- "cell_type": "markdown",
"metadata": {},
+ "cell_type": "markdown",
"source": [
"## Figure 2: evolution of the first three moments for different values of coalescence efficiency\n",
"https://www.essoar.org/doi/abs/10.1002/essoar.10510248.1"
]
},
+ {
+ "metadata": {},
+ "cell_type": "code",
+ "outputs": [],
+ "execution_count": null,
+ "source": [
+ "import sys\n",
+ "if 'google.colab' in sys.modules:\n",
+ " !pip --quiet install open-atmos-jupyter-utils\n",
+ " from open_atmos_jupyter_utils import pip_install_on_colab\n",
+ " pip_install_on_colab('PySDM-examples')"
+ ]
+ },
{
"cell_type": "code",
"execution_count": 1,
diff --git a/examples/PySDM_examples/Bolot_et_al_2013/fig_1.ipynb b/examples/PySDM_examples/Bolot_et_al_2013/fig_1.ipynb
index 289515828..0deb014a3 100644
--- a/examples/PySDM_examples/Bolot_et_al_2013/fig_1.ipynb
+++ b/examples/PySDM_examples/Bolot_et_al_2013/fig_1.ipynb
@@ -5,7 +5,7 @@
"id": "dbe9cc43",
"metadata": {},
"source": [
- "[](https://github.com/open-atmos/PySDM/blob/main/examples/PySDM_examples/Bolot_et_al_2013/fig_1.ipynb) \n",
+ "[](https://github.com/open-atmos/PySDM/blob/main/examples/PySDM_examples/Bolot_et_al_2013/fig_1.ipynb) \n",
"[](https://mybinder.org/v2/gh/open-atmos/PySDM.git/main?urlpath=lab/tree/examples/PySDM_examples/Bolot_et_al_2013/fig_1.ipynb)\n",
"[](https://colab.research.google.com/github/open-atmos/PySDM/blob/main/examples/PySDM_examples/Bolot_et_al_2013/fig_1.ipynb)"
]
diff --git a/examples/PySDM_examples/Bulenok_2023_MasterThesis/performance_comparison_Srivastava_Setup.ipynb b/examples/PySDM_examples/Bulenok_2023_MasterThesis/performance_comparison_Srivastava_Setup.ipynb
index 5421feda9..d56405c12 100644
--- a/examples/PySDM_examples/Bulenok_2023_MasterThesis/performance_comparison_Srivastava_Setup.ipynb
+++ b/examples/PySDM_examples/Bulenok_2023_MasterThesis/performance_comparison_Srivastava_Setup.ipynb
@@ -9,11 +9,16 @@
}
},
"source": [
- "[](https://github.com/open-atmos/PySDM/blob/main/examples/PySDM_examples/Bulenok_2023_MasterThesis/performance_comparison_Srivastava_Setup.ipynb)\n",
+ "[](https://github.com/open-atmos/PySDM/blob/main/examples/PySDM_examples/Bulenok_2023_MasterThesis/performance_comparison_Srivastava_Setup.ipynb)\n",
"[](https://mybinder.org/v2/gh/open-atmos/PySDM.git/main?urlpath=lab/tree/examples/PySDM_examples/Bulenok_2023_MasterThesis/performance_comparison_Srivastava_Setup.ipynb)\n",
"[](https://colab.research.google.com/github/open-atmos/PySDM/blob/main/examples/PySDM_examples/Bulenok_2023_MasterThesis/performance_comparison_Srivastava_Setup.ipynb)"
]
},
+ {
+ "metadata": {},
+ "cell_type": "markdown",
+ "source": " TODO #1417"
+ },
{
"cell_type": "code",
"execution_count": null,
diff --git a/examples/PySDM_examples/Gedzelman_and_Arnold_1994/fig_2.ipynb b/examples/PySDM_examples/Gedzelman_and_Arnold_1994/fig_2.ipynb
index b83df568e..30fc8d1c9 100644
--- a/examples/PySDM_examples/Gedzelman_and_Arnold_1994/fig_2.ipynb
+++ b/examples/PySDM_examples/Gedzelman_and_Arnold_1994/fig_2.ipynb
@@ -10,7 +10,7 @@
}
},
"source": [
- "[](https://github.com/open-atmos/PySDM/blob/main/examples/PySDM_examples/Gedzelman_and_Arnold_1994/fig_2.ipynb)\n",
+ "[](https://github.com/open-atmos/PySDM/blob/main/examples/PySDM_examples/Gedzelman_and_Arnold_1994/fig_2.ipynb)\n",
"[](https://mybinder.org/v2/gh/open-atmos/PySDM.git/main?urlpath=lab/tree/examples/PySDM_examples/Gedzelman_and_Arnold_1994/fig_2.ipynb)\n",
"[](https://colab.research.google.com/github/open-atmos/PySDM/blob/main/examples/PySDM_examples/Gedzelman_and_Arnold_1994/fig_2.ipynb)"
]
@@ -49,7 +49,7 @@
"if 'google.colab' in sys.modules:\n",
" !pip --quiet install open-atmos-jupyter-utils\n",
" from open_atmos_jupyter_utils import pip_install_on_colab\n",
- " pip_install_on_colab('PySDM')"
+ " pip_install_on_colab('PySDM-examples')"
]
},
{
diff --git a/examples/PySDM_examples/Grabowski_and_Pawlowska_2023/figure_1.ipynb b/examples/PySDM_examples/Grabowski_and_Pawlowska_2023/figure_1.ipynb
index 198c7803e..6bf136463 100644
--- a/examples/PySDM_examples/Grabowski_and_Pawlowska_2023/figure_1.ipynb
+++ b/examples/PySDM_examples/Grabowski_and_Pawlowska_2023/figure_1.ipynb
@@ -4,7 +4,7 @@
"cell_type": "markdown",
"metadata": {},
"source": [
- "[](https://github.com/open-atmos/PySDM/blob/main/examples/PySDM_examples/Grabowski_and_Pawlowska_2023/figure_1.ipynb)\n",
+ "[](https://github.com/open-atmos/PySDM/blob/main/examples/PySDM_examples/Grabowski_and_Pawlowska_2023/figure_1.ipynb)\n",
"[](https://mybinder.org/v2/gh/open-atmos/PySDM.git/main?urlpath=lab/tree/examples/PySDM_examples/Grabowski_and_Pawlowska_2023/figure_1.ipynb)\n",
"[](https://colab.research.google.com/github/open-atmos/PySDM/blob/main/examples/PySDM_examples/Grabowski_and_Pawlowska_2023/figure_1.ipynb)"
]
@@ -31,7 +31,7 @@
"source": [
"import sys\n",
"if 'google.colab' in sys.modules:\n",
- " !pip --quiet install \"open-atmos-jupyter-utils\"\n",
+ " !pip --quiet install open-atmos-jupyter-utils\n",
" from open_atmos_jupyter_utils import pip_install_on_colab\n",
" pip_install_on_colab('PySDM-examples')"
]
diff --git a/examples/PySDM_examples/Grabowski_and_Pawlowska_2023/figure_2.ipynb b/examples/PySDM_examples/Grabowski_and_Pawlowska_2023/figure_2.ipynb
index 1007ebc81..55c96cbeb 100644
--- a/examples/PySDM_examples/Grabowski_and_Pawlowska_2023/figure_2.ipynb
+++ b/examples/PySDM_examples/Grabowski_and_Pawlowska_2023/figure_2.ipynb
@@ -4,7 +4,7 @@
"cell_type": "markdown",
"metadata": {},
"source": [
- "[](https://github.com/open-atmos/PySDM/blob/main/examples/PySDM_examples/Grabowski_and_Pawlowska_2023/figure_2.ipynb)\n",
+ "[](https://github.com/open-atmos/PySDM/blob/main/examples/PySDM_examples/Grabowski_and_Pawlowska_2023/figure_2.ipynb)\n",
"[](https://mybinder.org/v2/gh/open-atmos/PySDM.git/main?urlpath=lab/tree/examples/PySDM_examples/Grabowski_and_Pawlowska_2023/figure_2.ipynb)\n",
"[](https://colab.research.google.com/github/open-atmos/PySDM/blob/main/examples/PySDM_examples/Grabowski_and_Pawlowska_2023/figure_2.ipynb)"
]
@@ -31,7 +31,7 @@
"source": [
"import sys\n",
"if 'google.colab' in sys.modules:\n",
- " !pip --quiet install \"open-atmos-jupyter-utils\"\n",
+ " !pip --quiet install open-atmos-jupyter-utils\n",
" from open_atmos_jupyter_utils import pip_install_on_colab\n",
" pip_install_on_colab('PySDM-examples')"
]
diff --git a/examples/PySDM_examples/Grabowski_and_Pawlowska_2023/figure_3.ipynb b/examples/PySDM_examples/Grabowski_and_Pawlowska_2023/figure_3.ipynb
index 8fdf64278..244a53c3b 100644
--- a/examples/PySDM_examples/Grabowski_and_Pawlowska_2023/figure_3.ipynb
+++ b/examples/PySDM_examples/Grabowski_and_Pawlowska_2023/figure_3.ipynb
@@ -4,7 +4,7 @@
"cell_type": "markdown",
"metadata": {},
"source": [
- "[](https://github.com/open-atmos/PySDM/blob/main/examples/PySDM_examples/Grabowski_and_Pawlowska_2023/figure_3.ipynb)\n",
+ "[](https://github.com/open-atmos/PySDM/blob/main/examples/PySDM_examples/Grabowski_and_Pawlowska_2023/figure_3.ipynb)\n",
"[](https://mybinder.org/v2/gh/open-atmos/PySDM.git/main?urlpath=lab/tree/examples/PySDM_examples/Grabowski_and_Pawlowska_2023/figure_3.ipynb)\n",
"[](https://colab.research.google.com/github/open-atmos/PySDM/blob/main/examples/PySDM_examples/Grabowski_and_Pawlowska_2023/figure_3.ipynb)"
]
@@ -31,7 +31,7 @@
"source": [
"import sys\n",
"if 'google.colab' in sys.modules:\n",
- " !pip --quiet install \"open-atmos-jupyter-utils\"\n",
+ " !pip --quiet install open-atmos-jupyter-utils\n",
" from open_atmos_jupyter_utils import pip_install_on_colab\n",
" pip_install_on_colab('PySDM-examples')"
]
diff --git a/examples/PySDM_examples/Grabowski_and_Pawlowska_2023/figure_4.ipynb b/examples/PySDM_examples/Grabowski_and_Pawlowska_2023/figure_4.ipynb
index 681be74f9..4850c6c1c 100644
--- a/examples/PySDM_examples/Grabowski_and_Pawlowska_2023/figure_4.ipynb
+++ b/examples/PySDM_examples/Grabowski_and_Pawlowska_2023/figure_4.ipynb
@@ -4,7 +4,7 @@
"cell_type": "markdown",
"metadata": {},
"source": [
- "[](https://github.com/open-atmos/PySDM/blob/main/examples/PySDM_examples/Grabowski_and_Pawlowska_2023/figure_4.ipynb)\n",
+ "[](https://github.com/open-atmos/PySDM/blob/main/examples/PySDM_examples/Grabowski_and_Pawlowska_2023/figure_4.ipynb)\n",
"[](https://mybinder.org/v2/gh/open-atmos/PySDM.git/main?urlpath=lab/tree/examples/PySDM_examples/Grabowski_and_Pawlowska_2023/figure_4.ipynb)\n",
"[](https://colab.research.google.com/github/open-atmos/PySDM/blob/main/examples/PySDM_examples/Grabowski_and_Pawlowska_2023/figure_4.ipynb)"
]
@@ -31,7 +31,7 @@
"source": [
"import sys\n",
"if 'google.colab' in sys.modules:\n",
- " !pip --quiet install \"open-atmos-jupyter-utils\"\n",
+ " !pip --quiet install open-atmos-jupyter-utils\n",
" from open_atmos_jupyter_utils import pip_install_on_colab\n",
" pip_install_on_colab('PySDM-examples')"
]
diff --git a/examples/PySDM_examples/Grabowski_and_Pawlowska_2023/figure_ripening_rate.ipynb b/examples/PySDM_examples/Grabowski_and_Pawlowska_2023/figure_ripening_rate.ipynb
index 8dde734ae..2540ed60f 100644
--- a/examples/PySDM_examples/Grabowski_and_Pawlowska_2023/figure_ripening_rate.ipynb
+++ b/examples/PySDM_examples/Grabowski_and_Pawlowska_2023/figure_ripening_rate.ipynb
@@ -4,7 +4,7 @@
"cell_type": "markdown",
"metadata": {},
"source": [
- "[](https://github.com/open-atmos/PySDM/blob/main/examples/PySDM_examples/Grabowski_and_Pawlowska_2023/figure_ripening_rate.ipynb.ipynb) \n",
+ "[](https://github.com/open-atmos/PySDM/blob/main/examples/PySDM_examples/Grabowski_and_Pawlowska_2023/figure_ripening_rate.ipynb.ipynb) \n",
"[](https://mybinder.org/v2/gh/open-atmos/PySDM.git/main?urlpath=examples/PySDM_examples/Grabowski_and_Pawlowska_2023/figure_ripening_rate.ipynb.ipynb) \n",
"[](https://colab.research.google.com/github/open-atmos/PySDM/blob/main/examples/PySDM_examples/Grabowski_and_Pawlowska_2023/figure_ripening_rate.ipynb.ipynb)"
]
@@ -31,7 +31,7 @@
"source": [
"import sys\n",
"if 'google.colab' in sys.modules:\n",
- " !pip --quiet install \"open-atmos-jupyter-utils\"\n",
+ " !pip --quiet install open-atmos-jupyter-utils\n",
" from open_atmos_jupyter_utils import pip_install_on_colab\n",
" pip_install_on_colab('PySDM-examples')"
]
diff --git a/examples/PySDM_examples/Graf_et_al_2019/Table_1.ipynb b/examples/PySDM_examples/Graf_et_al_2019/Table_1.ipynb
index 1534b52bd..df6c7b657 100644
--- a/examples/PySDM_examples/Graf_et_al_2019/Table_1.ipynb
+++ b/examples/PySDM_examples/Graf_et_al_2019/Table_1.ipynb
@@ -10,7 +10,7 @@
}
},
"source": [
- "[](https://github.com/open-atmos/PySDM/blob/main/examples/PySDM_examples/Graf_et_al_2019/Table_1.ipynb)\n",
+ "[](https://github.com/open-atmos/PySDM/blob/main/examples/PySDM_examples/Graf_et_al_2019/Table_1.ipynb)\n",
"[](https://mybinder.org/v2/gh/open-atmos/PySDM.git/main?urlpath=lab/tree/examples/PySDM_examples/Graf_et_al_2019/Table_1.ipynb)\n",
"[](https://colab.research.google.com/github/open-atmos/PySDM/blob/main/examples/PySDM_examples/Graf_et_al_2019/Table_1.ipynb)"
]
@@ -32,6 +32,20 @@
"Exemplifies computation of: δ18O, δ2H, excess-d "
]
},
+ {
+ "metadata": {},
+ "cell_type": "code",
+ "outputs": [],
+ "execution_count": null,
+ "source": [
+ "import sys\n",
+ "if 'google.colab' in sys.modules:\n",
+ " !pip --quiet install open-atmos-jupyter-utils\n",
+ " from open_atmos_jupyter_utils import pip_install_on_colab\n",
+ " pip_install_on_colab('PySDM-examples')"
+ ],
+ "id": "551e99a9150d82e9"
+ },
{
"cell_type": "code",
"execution_count": 3,
diff --git a/examples/PySDM_examples/Graf_et_al_2019/figure_4.ipynb b/examples/PySDM_examples/Graf_et_al_2019/figure_4.ipynb
index c0f3c5508..6db7fb0df 100644
--- a/examples/PySDM_examples/Graf_et_al_2019/figure_4.ipynb
+++ b/examples/PySDM_examples/Graf_et_al_2019/figure_4.ipynb
@@ -7,7 +7,7 @@
"collapsed": false
},
"source": [
- "[](https://github.com/open-atmos/PySDM/blob/main/examples/PySDM_examples/Graf_et_al_2019/figure_4.ipynb)\n",
+ "[](https://github.com/open-atmos/PySDM/blob/main/examples/PySDM_examples/Graf_et_al_2019/figure_4.ipynb)\n",
"[](https://mybinder.org/v2/gh/open-atmos/PySDM.git/main?urlpath=examples/PySDM_examples/Graf_et_al_2019/figure_4.ipynb) \n",
"[](https://colab.research.google.com/github/open-atmos/PySDM/blob/main/examples/PySDM_examples/Graf_et_al_2019/figure_4.ipynb)"
]
@@ -22,6 +22,20 @@
"based on [Graf et al. 2019](https://doi.org/10.5194/acp-19-747-2019)"
]
},
+ {
+ "metadata": {},
+ "cell_type": "code",
+ "outputs": [],
+ "execution_count": null,
+ "source": [
+ "import sys\n",
+ "if 'google.colab' in sys.modules:\n",
+ " !pip --quiet install open-atmos-jupyter-utils\n",
+ " from open_atmos_jupyter_utils import pip_install_on_colab\n",
+ " pip_install_on_colab('PySDM-examples')"
+ ],
+ "id": "b2c87898f6737935"
+ },
{
"cell_type": "code",
"execution_count": 13,
diff --git a/examples/PySDM_examples/Jaruga_and_Pawlowska_2018/fig_2.ipynb b/examples/PySDM_examples/Jaruga_and_Pawlowska_2018/fig_2.ipynb
index e043b5ec8..355fe9410 100644
--- a/examples/PySDM_examples/Jaruga_and_Pawlowska_2018/fig_2.ipynb
+++ b/examples/PySDM_examples/Jaruga_and_Pawlowska_2018/fig_2.ipynb
@@ -4,7 +4,7 @@
"cell_type": "markdown",
"metadata": {},
"source": [
- "[](https://github.com/open-atmos/PySDM/blob/main/examples/PySDM_examples/Jaruga_and_Pawlowska_2018/fig_2.ipynb) \n",
+ "[](https://github.com/open-atmos/PySDM/blob/main/examples/PySDM_examples/Jaruga_and_Pawlowska_2018/fig_2.ipynb) \n",
"[](https://mybinder.org/v2/gh/open-atmos/PySDM.git/main?urlpath=lab/tree/examples/PySDM_examples/Jaruga_and_Pawlowska_2018/fig_2.ipynb)\n",
"[](https://colab.research.google.com/github/open-atmos/PySDM/blob/main/examples/PySDM_examples/Jaruga_and_Pawlowska/fig_2.ipynb)"
]
diff --git a/examples/PySDM_examples/Jaruga_and_Pawlowska_2018/fig_3.ipynb b/examples/PySDM_examples/Jaruga_and_Pawlowska_2018/fig_3.ipynb
index 5eb9f7557..b64d7d272 100644
--- a/examples/PySDM_examples/Jaruga_and_Pawlowska_2018/fig_3.ipynb
+++ b/examples/PySDM_examples/Jaruga_and_Pawlowska_2018/fig_3.ipynb
@@ -8,7 +8,7 @@
}
},
"source": [
- "[](https://github.com/open-atmos/PySDM/blob/main/examples/PySDM_examples/Jaruga_and_Pawlowska_2018/fig_3.ipynb)\n",
+ "[](https://github.com/open-atmos/PySDM/blob/main/examples/PySDM_examples/Jaruga_and_Pawlowska_2018/fig_3.ipynb)\n",
"[](https://mybinder.org/v2/gh/open-atmos/PySDM.git/main?urlpath=lab/tree/examples/PySDM_examples/Jaruga_and_Pawlowska_2018/fig_3.ipynb)\n",
"[](https://colab.research.google.com/github/open-atmos/PySDM/blob/main/examples/PySDM_examples/Jaruga_and_Pawlowska_2018/fig_3.ipynb)"
]
diff --git a/examples/PySDM_examples/Jensen_and_Nugent_2017/Fig_1.ipynb b/examples/PySDM_examples/Jensen_and_Nugent_2017/Fig_1.ipynb
index 0b593272b..957eab36c 100644
--- a/examples/PySDM_examples/Jensen_and_Nugent_2017/Fig_1.ipynb
+++ b/examples/PySDM_examples/Jensen_and_Nugent_2017/Fig_1.ipynb
@@ -7,7 +7,7 @@
"collapsed": false
},
"source": [
- "[](https://github.com/open-atmos/PySDM/blob/main/examples/PySDM_examples/Jensen_and_Nugent_2017/Fig_1.ipynb) \n",
+ "[](https://github.com/open-atmos/PySDM/blob/main/examples/PySDM_examples/Jensen_and_Nugent_2017/Fig_1.ipynb) \n",
"[](https://mybinder.org/v2/gh/open-atmos/PySDM.git/main?urlpath=lab/tree/examples/PySDM_examples/Jensen_and_Nugent_2017/Fig_1.ipynb)\n",
"[](https://colab.research.google.com/github/open-atmos/PySDM/blob/main/examples/PySDM_examples/Jensen_and_Nugent_2017/Fig_1.ipynb)"
]
@@ -36,9 +36,9 @@
"source": [
"import sys\n",
"if 'google.colab' in sys.modules:\n",
- " !pip --quiet install \"open-atmos-jupyter-utils\"\n",
+ " !pip --quiet install open-atmos-jupyter-utils\n",
" from open_atmos_jupyter_utils import pip_install_on_colab\n",
- " pip_install_on_colab('PySDM-examples>=2.45')"
+ " pip_install_on_colab('PySDM-examples')"
]
},
{
diff --git a/examples/PySDM_examples/Jensen_and_Nugent_2017/Fig_3_and_Tab_4_upper_rows.ipynb b/examples/PySDM_examples/Jensen_and_Nugent_2017/Fig_3_and_Tab_4_upper_rows.ipynb
index f499fa833..6f8b3dbba 100644
--- a/examples/PySDM_examples/Jensen_and_Nugent_2017/Fig_3_and_Tab_4_upper_rows.ipynb
+++ b/examples/PySDM_examples/Jensen_and_Nugent_2017/Fig_3_and_Tab_4_upper_rows.ipynb
@@ -7,7 +7,7 @@
"collapsed": false
},
"source": [
- "[](https://github.com/open-atmos/PySDM/blob/main/examples/PySDM_examples/Jensen_and_Nugent_2017/Fig_3_and_Tab_4_upper_rows.ipynb) \n",
+ "[](https://github.com/open-atmos/PySDM/blob/main/examples/PySDM_examples/Jensen_and_Nugent_2017/Fig_3_and_Tab_4_upper_rows.ipynb) \n",
"[](https://mybinder.org/v2/gh/open-atmos/PySDM.git/main?urlpath=lab/tree/examples/PySDM_examples/Jensen_and_Nugent_2017/Fig_3_and_Tab_4_upper_rows.ipynb)\n",
"[](https://colab.research.google.com/github/open-atmos/PySDM/blob/main/examples/PySDM_examples/Jensen_and_Nugent_2017/Fig_3_and_Tab_4_upper_rows.ipynb)"
]
@@ -36,9 +36,9 @@
"source": [
"import sys\n",
"if 'google.colab' in sys.modules:\n",
- " !pip --quiet install \"open-atmos-jupyter-utils\"\n",
+ " !pip --quiet install open-atmos-jupyter-utils\n",
" from open_atmos_jupyter_utils import pip_install_on_colab\n",
- " pip_install_on_colab('PySDM-examples>=2.45')"
+ " pip_install_on_colab('PySDM-examples')"
]
},
{
diff --git a/examples/PySDM_examples/Jensen_and_Nugent_2017/Fig_4_and_7_and_Tab_4_bottom_rows.ipynb b/examples/PySDM_examples/Jensen_and_Nugent_2017/Fig_4_and_7_and_Tab_4_bottom_rows.ipynb
index fcd99fcb2..2b23d16ce 100644
--- a/examples/PySDM_examples/Jensen_and_Nugent_2017/Fig_4_and_7_and_Tab_4_bottom_rows.ipynb
+++ b/examples/PySDM_examples/Jensen_and_Nugent_2017/Fig_4_and_7_and_Tab_4_bottom_rows.ipynb
@@ -10,7 +10,7 @@
}
},
"source": [
- "[](https://github.com/open-atmos/PySDM/blob/main/examples/PySDM_examples/Jensen_and_Nugent_2017/Fig_4_and_7_and_Tab_4_bottom_rows.ipynb) \n",
+ "[](https://github.com/open-atmos/PySDM/blob/main/examples/PySDM_examples/Jensen_and_Nugent_2017/Fig_4_and_7_and_Tab_4_bottom_rows.ipynb) \n",
"[](https://mybinder.org/v2/gh/open-atmos/PySDM.git/main?urlpath=lab/tree/examples/PySDM_examples/Jensen_and_Nugent_2017/Fig_4_and_7_and_Tab_4_bottom_rows.ipynb)\n",
"[](https://colab.research.google.com/github/open-atmos/PySDM/blob/main/examples/PySDM_examples/Jensen_and_Nugent_2017/Fig_4_and_7_and_Tab_4_bottom_rows.ipynb)"
]
@@ -30,34 +30,32 @@
},
{
"cell_type": "code",
- "execution_count": 1,
"id": "f2673625",
"metadata": {
"ExecuteTime": {
- "end_time": "2024-03-22T16:18:27.545970Z",
- "start_time": "2024-03-22T16:18:27.542295Z"
+ "end_time": "2024-11-08T21:53:02.092999Z",
+ "start_time": "2024-11-08T21:53:02.087100Z"
}
},
- "outputs": [],
"source": [
"import sys\n",
"if 'google.colab' in sys.modules:\n",
- " !pip --quiet install \"open-atmos-jupyter-utils\"\n",
+ " !pip --quiet install open-atmos-jupyter-utils\n",
" from open_atmos_jupyter_utils import pip_install_on_colab\n",
- " pip_install_on_colab('PySDM-examples>=2.45')"
- ]
+ " pip_install_on_colab('PySDM-examples')"
+ ],
+ "outputs": [],
+ "execution_count": 15
},
{
"cell_type": "code",
- "execution_count": 9,
"id": "initial_id",
"metadata": {
"ExecuteTime": {
- "end_time": "2024-03-22T16:18:30.961400Z",
- "start_time": "2024-03-22T16:18:28.074022Z"
+ "end_time": "2024-11-08T21:53:04.307601Z",
+ "start_time": "2024-11-08T21:53:02.327950Z"
}
},
- "outputs": [],
"source": [
"from matplotlib import pyplot\n",
"import numpy as np\n",
@@ -71,2393 +69,42 @@
"\n",
"settings = Settings(aerosol=\"modified polluted\", cloud_type=\"Sc\")\n",
"simulation = Simulation(settings, gccn=True)"
- ]
+ ],
+ "outputs": [],
+ "execution_count": 16
},
{
"cell_type": "code",
- "execution_count": 3,
"id": "153fe91c37fbdea7",
"metadata": {
- "ExecuteTime": {
- "end_time": "2024-03-22T16:18:32.387429Z",
- "start_time": "2024-03-22T16:18:30.965857Z"
- },
"collapsed": false,
"jupyter": {
"outputs_hidden": false
+ },
+ "ExecuteTime": {
+ "end_time": "2024-11-08T21:52:51.116093Z",
+ "start_time": "2024-11-08T21:52:39.350484Z"
}
},
- "outputs": [],
"source": [
"output = simulation.run(steps_per_output_interval= 5)"
- ]
+ ],
+ "outputs": [],
+ "execution_count": 9
},
{
"cell_type": "code",
- "execution_count": 4,
"id": "a99bff26cf55cd96",
"metadata": {
- "ExecuteTime": {
- "end_time": "2024-03-22T16:18:32.820278Z",
- "start_time": "2024-03-22T16:18:32.408087Z"
- },
"collapsed": false,
"jupyter": {
"outputs_hidden": false
- }
- },
- "outputs": [
- {
- "data": {
- "image/svg+xml": [
- "\n",
- "\n",
- "\n"
- ],
- "text/plain": [
- ""
- ]
- },
- "metadata": {},
- "output_type": "display_data"
},
- {
- "data": {
- "application/vnd.jupyter.widget-view+json": {
- "model_id": "23a1c49c9bb947668606c8a9538f447d",
- "version_major": 2,
- "version_minor": 0
- },
- "text/plain": [
- "HTML(value=\"./Fig_4.pdf
\")"
- ]
- },
- "metadata": {},
- "output_type": "display_data"
+ "ExecuteTime": {
+ "end_time": "2024-11-08T21:52:51.994997Z",
+ "start_time": "2024-11-08T21:52:51.126533Z"
}
- ],
+ },
"source": [
"masks = figure(\n",
" output=output,\n",
@@ -2469,2197 +116,48 @@
" return_masks=True\n",
")\n",
"show_plot(\"Fig_4.pdf\")"
- ]
- },
- {
- "cell_type": "code",
- "execution_count": 5,
- "id": "e8bfc1fa5d5de653",
- "metadata": {
- "ExecuteTime": {
- "end_time": "2024-03-22T16:18:33.175467Z",
- "start_time": "2024-03-22T16:18:32.849Z"
- },
- "collapsed": false,
- "jupyter": {
- "outputs_hidden": false
- }
- },
+ ],
"outputs": [
{
"data": {
- "image/svg+xml": [
- "\n",
- "\n",
- "\n"
- ],
"text/plain": [
""
- ]
+ ],
+ "image/svg+xml": "\n\n\n"
},
"metadata": {},
"output_type": "display_data"
},
{
"data": {
+ "text/plain": [
+ "HBox(children=(HTML(value=\"./Fig_4.pdf
\"), HTML(value=\"./Fig_7.pdf
\")"
- ]
+ "version_minor": 0,
+ "model_id": "04df5485904c4e3fbb9d9a3faa08a489"
+ }
},
"metadata": {},
"output_type": "display_data"
}
],
+ "execution_count": 10
+ },
+ {
+ "cell_type": "code",
+ "id": "e8bfc1fa5d5de653",
+ "metadata": {
+ "collapsed": false,
+ "jupyter": {
+ "outputs_hidden": false
+ },
+ "ExecuteTime": {
+ "end_time": "2024-11-08T21:52:52.361463Z",
+ "start_time": "2024-11-08T21:52:52.005777Z"
+ }
+ },
"source": [
"fig, axs = pyplot.subplot_mosaic(\n",
" mosaic=[[\"ascent\", \"descent\"]],\n",
@@ -4712,23 +210,48 @@
" axs[\"descent\"].set_xlabel(\"Supersaturation (%)\")\n",
" \n",
"show_plot(\"Fig_7.pdf\")"
- ]
+ ],
+ "outputs": [
+ {
+ "data": {
+ "text/plain": [
+ ""
+ ],
+ "image/svg+xml": "\n\n\n"
+ },
+ "metadata": {},
+ "output_type": "display_data"
+ },
+ {
+ "data": {
+ "text/plain": [
+ "HBox(children=(HTML(value=\"./Fig_7.pdf
\"), HTML(value=\"=2.45')"
+ " pip_install_on_colab('PySDM-examples')"
]
},
{
diff --git a/examples/PySDM_examples/Jensen_and_Nugent_2017/Fig_6.ipynb b/examples/PySDM_examples/Jensen_and_Nugent_2017/Fig_6.ipynb
index 15324d6a7..053ebc8d9 100644
--- a/examples/PySDM_examples/Jensen_and_Nugent_2017/Fig_6.ipynb
+++ b/examples/PySDM_examples/Jensen_and_Nugent_2017/Fig_6.ipynb
@@ -7,7 +7,7 @@
"collapsed": false
},
"source": [
- "[](https://github.com/open-atmos/PySDM/blob/main/examples/PySDM_examples/Jensen_and_Nugent_2017/Fig_6.ipynb) \n",
+ "[](https://github.com/open-atmos/PySDM/blob/main/examples/PySDM_examples/Jensen_and_Nugent_2017/Fig_6.ipynb) \n",
"[](https://mybinder.org/v2/gh/open-atmos/PySDM.git/main?urlpath=lab/tree/examples/PySDM_examples/Jensen_and_Nugent_2017/Fig_6.ipynb)\n",
"[](https://colab.research.google.com/github/open-atmos/PySDM/blob/main/examples/PySDM_examples/Jensen_and_Nugent_2017/Fig_6.ipynb)"
]
@@ -36,9 +36,9 @@
"source": [
"import sys\n",
"if 'google.colab' in sys.modules:\n",
- " !pip --quiet install \"open-atmos-jupyter-utils\"\n",
+ " !pip --quiet install open-atmos-jupyter-utils\n",
" from open_atmos_jupyter_utils import pip_install_on_colab\n",
- " pip_install_on_colab('PySDM-examples>=2.45')"
+ " pip_install_on_colab('PySDM-examples')"
]
},
{
diff --git a/examples/PySDM_examples/Jensen_and_Nugent_2017/Fig_8.ipynb b/examples/PySDM_examples/Jensen_and_Nugent_2017/Fig_8.ipynb
index 66ddaa947..177545fe5 100644
--- a/examples/PySDM_examples/Jensen_and_Nugent_2017/Fig_8.ipynb
+++ b/examples/PySDM_examples/Jensen_and_Nugent_2017/Fig_8.ipynb
@@ -10,7 +10,7 @@
}
},
"source": [
- "[](https://github.com/open-atmos/PySDM/blob/main/examples/PySDM_examples/Jensen_and_Nugent_2017/Fig_8.ipynb) \n",
+ "[](https://github.com/open-atmos/PySDM/blob/main/examples/PySDM_examples/Jensen_and_Nugent_2017/Fig_8.ipynb) \n",
"[](https://mybinder.org/v2/gh/open-atmos/PySDM.git/main?urlpath=lab/tree/examples/PySDM_examples/Jensen_and_Nugent_2017/Fig_8.ipynb)\n",
"[](https://colab.research.google.com/github/open-atmos/PySDM/blob/main/examples/PySDM_examples/Jensen_and_Nugent_2017/Fig_8.ipynb)"
]
@@ -42,9 +42,9 @@
"source": [
"import sys\n",
"if 'google.colab' in sys.modules:\n",
- " !pip --quiet install \"open-atmos-jupyter-utils\"\n",
+ " !pip --quiet install open-atmos-jupyter-utils\n",
" from open_atmos_jupyter_utils import pip_install_on_colab\n",
- " pip_install_on_colab('PySDM-examples>=2.45')"
+ " pip_install_on_colab('PySDM-examples')"
]
},
{
diff --git a/examples/PySDM_examples/Kreidenweis_et_al_2003/fig_1.ipynb b/examples/PySDM_examples/Kreidenweis_et_al_2003/fig_1.ipynb
index ee67f3974..2d7979f2b 100644
--- a/examples/PySDM_examples/Kreidenweis_et_al_2003/fig_1.ipynb
+++ b/examples/PySDM_examples/Kreidenweis_et_al_2003/fig_1.ipynb
@@ -6,7 +6,7 @@
"collapsed": true
},
"source": [
- "[](https://github.com/open-atmos/PySDM/blob/main/examples/PySDM_examples/Kreidenweis_et_al_2003/fig_1.ipynb) \n",
+ "[](https://github.com/open-atmos/PySDM/blob/main/examples/PySDM_examples/Kreidenweis_et_al_2003/fig_1.ipynb) \n",
"[](https://mybinder.org/v2/gh/open-atmos/PySDM.git/main?urlpath=lab/tree/examples/PySDM_examples/Kreidenweis_et_al_2003/fig_1.ipynb)\n",
"[](https://colab.research.google.com/github/open-atmos/PySDM/blob/main/examples/PySDM_examples/Kreidenweis_et_al_2003/fig_1.ipynb)"
]
diff --git a/examples/PySDM_examples/Lamb_et_al_2017/fig_4.ipynb b/examples/PySDM_examples/Lamb_et_al_2017/fig_4.ipynb
index eb75ae94c..1622e2b8e 100644
--- a/examples/PySDM_examples/Lamb_et_al_2017/fig_4.ipynb
+++ b/examples/PySDM_examples/Lamb_et_al_2017/fig_4.ipynb
@@ -10,7 +10,7 @@
}
},
"source": [
- "[](https://github.com/open-atmos/PySDM/blob/main/examples/PySDM_examples/Lamb_et_al_2017/fig_4.ipynb)\n",
+ "[](https://github.com/open-atmos/PySDM/blob/main/examples/PySDM_examples/Lamb_et_al_2017/fig_4.ipynb)\n",
"[](https://mybinder.org/v2/gh/open-atmos/PySDM.git/main?urlpath=lab/tree/examples/PySDM_examples/Lamb_et_al_2017/fig_4.ipynb)\n",
"[](https://colab.research.google.com/github/open-atmos/PySDM/blob/main/examples/PySDM_examples/Lamb_et_al_2017/fig_4.ipynb)"
]
@@ -40,7 +40,7 @@
"if 'google.colab' in sys.modules:\n",
" !pip --quiet install open-atmos-jupyter-utils\n",
" from open_atmos_jupyter_utils import pip_install_on_colab\n",
- " pip_install_on_colab('PySDM>2.41')"
+ " pip_install_on_colab('PySDM-examples')"
]
},
{
diff --git a/examples/PySDM_examples/Lowe_et_al_2019/fig_1.ipynb b/examples/PySDM_examples/Lowe_et_al_2019/fig_1.ipynb
index c50bb66ec..4d37d633a 100644
--- a/examples/PySDM_examples/Lowe_et_al_2019/fig_1.ipynb
+++ b/examples/PySDM_examples/Lowe_et_al_2019/fig_1.ipynb
@@ -8,7 +8,7 @@
}
},
"source": [
- "[](https://github.com/open-atmos/PySDM/blob/main/examples/PySDM_examples/Lowe_et_al_2019/fig_1.ipynb)\n",
+ "[](https://github.com/open-atmos/PySDM/blob/main/examples/PySDM_examples/Lowe_et_al_2019/fig_1.ipynb)\n",
"[](https://mybinder.org/v2/gh/open-atmos/PySDM.git/main?urlpath=lab/tree/examples/PySDM_examples/Lowe_et_al_2019/fig_1.ipynb)\n",
"[](https://colab.research.google.com/github/open-atmos/PySDM/blob/main/examples/PySDM_examples/Lowe_et_al_2019/fig_1.ipynb)"
]
diff --git a/examples/PySDM_examples/Lowe_et_al_2019/fig_2.ipynb b/examples/PySDM_examples/Lowe_et_al_2019/fig_2.ipynb
index 3a3ec7f03..b09b2a202 100644
--- a/examples/PySDM_examples/Lowe_et_al_2019/fig_2.ipynb
+++ b/examples/PySDM_examples/Lowe_et_al_2019/fig_2.ipynb
@@ -4,7 +4,7 @@
"cell_type": "markdown",
"metadata": {},
"source": [
- "[](https://github.com/open-atmos/PySDM/blob/main/examples/PySDM_examples/Lowe_et_al_2019/fig_2.ipynb)\n",
+ "[](https://github.com/open-atmos/PySDM/blob/main/examples/PySDM_examples/Lowe_et_al_2019/fig_2.ipynb)\n",
"[](https://mybinder.org/v2/gh/open-atmos/PySDM.git/main?urlpath=lab/tree/examples/PySDM_examples/Lowe_et_al_2019/fig_2.ipynb)\n",
"[](https://colab.research.google.com/github/open-atmos/PySDM/blob/main/examples/PySDM_examples/Lowe_et_al_2019/fig_2.ipynb)"
]
diff --git a/examples/PySDM_examples/Lowe_et_al_2019/fig_3.ipynb b/examples/PySDM_examples/Lowe_et_al_2019/fig_3.ipynb
index 1de894cc0..63774e37a 100644
--- a/examples/PySDM_examples/Lowe_et_al_2019/fig_3.ipynb
+++ b/examples/PySDM_examples/Lowe_et_al_2019/fig_3.ipynb
@@ -4,7 +4,7 @@
"cell_type": "markdown",
"metadata": {},
"source": [
- "[](https://github.com/open-atmos/PySDM/blob/main/examples/PySDM_examples/Lowe_et_al_2019/fig_3.ipynb)\n",
+ "[](https://github.com/open-atmos/PySDM/blob/main/examples/PySDM_examples/Lowe_et_al_2019/fig_3.ipynb)\n",
"[](https://mybinder.org/v2/gh/open-atmos/PySDM.git/main?urlpath=lab/tree/examples/PySDM_examples/Lowe_et_al_2019/fig_3.ipynb)\n",
"[](https://colab.research.google.com/github/open-atmos/PySDM/blob/main/examples/PySDM_examples/Lowe_et_al_2019/fig_3.ipynb)"
]
diff --git a/examples/PySDM_examples/Lowe_et_al_2019/fig_s2.ipynb b/examples/PySDM_examples/Lowe_et_al_2019/fig_s2.ipynb
index c81e9157b..1baaf8314 100644
--- a/examples/PySDM_examples/Lowe_et_al_2019/fig_s2.ipynb
+++ b/examples/PySDM_examples/Lowe_et_al_2019/fig_s2.ipynb
@@ -4,7 +4,7 @@
"cell_type": "markdown",
"metadata": {},
"source": [
- "[](https://github.com/open-atmos/PySDM/blob/main/examples/PySDM_examples/Lowe_et_al_2019/fig_s2.ipynb)\n",
+ "[](https://github.com/open-atmos/PySDM/blob/main/examples/PySDM_examples/Lowe_et_al_2019/fig_s2.ipynb)\n",
"[](https://mybinder.org/v2/gh/open-atmos/PySDM.git/main?urlpath=lab/tree/examples/PySDM_examples/Lowe_et_al_2019/fig_s2.ipynb)\n",
"[](https://colab.research.google.com/github/open-atmos/PySDM/blob/main/examples/PySDM_examples/Lowe_et_al_2019/fig_s2.ipynb)"
]
diff --git a/examples/PySDM_examples/Merlivat_and_Nief_1967/fig_2.ipynb b/examples/PySDM_examples/Merlivat_and_Nief_1967/fig_2.ipynb
index b21f1405a..29f503e1b 100644
--- a/examples/PySDM_examples/Merlivat_and_Nief_1967/fig_2.ipynb
+++ b/examples/PySDM_examples/Merlivat_and_Nief_1967/fig_2.ipynb
@@ -5,7 +5,7 @@
"id": "dbe9cc43",
"metadata": {},
"source": [
- "[](https://github.com/open-atmos/PySDM/blob/main/examples/PySDM_examples/Merlivat_and_Nief_1967/fig_2.ipynb)\n",
+ "[](https://github.com/open-atmos/PySDM/blob/main/examples/PySDM_examples/Merlivat_and_Nief_1967/fig_2.ipynb)\n",
"[](https://mybinder.org/v2/gh/open-atmos/PySDM.git/main?urlpath=lab/tree/examples/PySDM_examples/Merlivat_and_Nief_1967/fig_2.ipynb)\n",
"[](https://colab.research.google.com/github/open-atmos/PySDM/blob/main/examples/PySDM_examples/Merlivat_and_Nief_1967/fig_2.ipynb)"
]
diff --git a/examples/PySDM_examples/Miyake_et_al_1968/fig_19.ipynb b/examples/PySDM_examples/Miyake_et_al_1968/fig_19.ipynb
index b5b6919ec..c96250221 100644
--- a/examples/PySDM_examples/Miyake_et_al_1968/fig_19.ipynb
+++ b/examples/PySDM_examples/Miyake_et_al_1968/fig_19.ipynb
@@ -5,7 +5,7 @@
"id": "06b74a1b-fc97-497b-ad08-7e253c6a7378",
"metadata": {},
"source": [
- "[](https://github.com/open-atmos/PySDM/blob/main/examples/PySDM_examples/Miyake_et_al_1968/fig_19.ipynb)\n",
+ "[](https://github.com/open-atmos/PySDM/blob/main/examples/PySDM_examples/Miyake_et_al_1968/fig_19.ipynb)\n",
"[](https://mybinder.org/v2/gh/open-atmos/PySDM.git/main?urlpath=lab/tree/examples/PySDM_examples/Miyake_et_al_1968/fig_19.ipynb)\n",
"[](https://colab.research.google.com/github/open-atmos/PySDM/blob/main/examples/PySDM_examples/Miyake_et_al_1968/fig_19.ipynb)"
]
diff --git a/examples/PySDM_examples/Morrison_and_Grabowski_2007/fig_2.ipynb b/examples/PySDM_examples/Morrison_and_Grabowski_2007/fig_2.ipynb
index fac299c79..ce82f5f43 100644
--- a/examples/PySDM_examples/Morrison_and_Grabowski_2007/fig_2.ipynb
+++ b/examples/PySDM_examples/Morrison_and_Grabowski_2007/fig_2.ipynb
@@ -9,7 +9,7 @@
}
},
"source": [
- "[](https://github.com/open-atmos/PySDM/blob/main/examples/PySDM_examples/Morrison_and_Grabowski_2007/fig_2.ipynb)\n",
+ "[](https://github.com/open-atmos/PySDM/blob/main/examples/PySDM_examples/Morrison_and_Grabowski_2007/fig_2.ipynb)\n",
"[](https://mybinder.org/v2/gh/open-atmos/PySDM.git/main?urlpath=lab/tree/examples/PySDM_examples/Morrison_and_Grabowski_2007/fig_2.ipynb)\n",
"[](https://colab.research.google.com/github/open-atmos/PySDM/blob/main/examples/PySDM_examples/Morrison_and_Grabowski_2007/fig_2.ipynb)"
]
diff --git a/examples/PySDM_examples/Morrison_and_Grabowski_2007/fig_3.ipynb b/examples/PySDM_examples/Morrison_and_Grabowski_2007/fig_3.ipynb
index edb1769b7..19333d895 100644
--- a/examples/PySDM_examples/Morrison_and_Grabowski_2007/fig_3.ipynb
+++ b/examples/PySDM_examples/Morrison_and_Grabowski_2007/fig_3.ipynb
@@ -4,7 +4,7 @@
"cell_type": "markdown",
"metadata": {},
"source": [
- "[](https://github.com/open-atmos/PySDM/blob/main/examples/PySDM_examples/Morrison_and_Grabowski_2007/fig_3.ipynb)\n",
+ "[](https://github.com/open-atmos/PySDM/blob/main/examples/PySDM_examples/Morrison_and_Grabowski_2007/fig_3.ipynb)\n",
"[](https://mybinder.org/v2/gh/open-atmos/PySDM.git/main?urlpath=lab/tree/examples/PySDM_examples/Morrison_and_Grabowski_2007/fig_3.ipynb)\n",
"[](https://colab.research.google.com/github/open-atmos/PySDM/blob/main/examples/PySDM_examples/Morrison_and_Grabowski_2007/fig_3.ipynb)"
]
diff --git a/examples/PySDM_examples/Niedermeier_et_al_2014/fig_2.ipynb b/examples/PySDM_examples/Niedermeier_et_al_2014/fig_2.ipynb
index 8645c6458..dd8e2682e 100644
--- a/examples/PySDM_examples/Niedermeier_et_al_2014/fig_2.ipynb
+++ b/examples/PySDM_examples/Niedermeier_et_al_2014/fig_2.ipynb
@@ -5,7 +5,7 @@
"id": "9c727d1b",
"metadata": {},
"source": [
- "[](https://github.com/open-atmos/PySDM/blob/main/examples/PySDM_examples/Niedermeier_et_al_2014/fig_2.ipynb)\n",
+ "[](https://github.com/open-atmos/PySDM/blob/main/examples/PySDM_examples/Niedermeier_et_al_2014/fig_2.ipynb)\n",
"[](https://mybinder.org/v2/gh/open-atmos/PySDM.git/main?urlpath=lab/tree/examples/PySDM_examples/Niedermeier_et_al_2014/fig_2.ipynb)\n",
"[](https://colab.research.google.com/github/open-atmos/PySDM/blob/main/examples/PySDM_examples/Niedermeier_et_al_2014/fig_2.ipynb)"
]
@@ -19,17 +19,34 @@
"https://doi.org/10.1002/2013GL058684"
]
},
+ {
+ "metadata": {
+ "ExecuteTime": {
+ "end_time": "2024-11-08T22:26:00.480159Z",
+ "start_time": "2024-11-08T22:26:00.477667Z"
+ }
+ },
+ "cell_type": "code",
+ "source": [
+ "import sys\n",
+ "if 'google.colab' in sys.modules:\n",
+ " !pip --quiet install open-atmos-jupyter-utils\n",
+ " from open_atmos_jupyter_utils import pip_install_on_colab\n",
+ " pip_install_on_colab('PySDM-examples')"
+ ],
+ "id": "36425cff812f5c82",
+ "outputs": [],
+ "execution_count": 5
+ },
{
"cell_type": "code",
- "execution_count": 4,
"id": "7d32494f",
"metadata": {
"ExecuteTime": {
- "end_time": "2024-02-01T07:40:56.585800Z",
- "start_time": "2024-02-01T07:40:56.576273Z"
+ "end_time": "2024-11-08T22:26:00.487391Z",
+ "start_time": "2024-11-08T22:26:00.485418Z"
}
},
- "outputs": [],
"source": [
"from matplotlib import pyplot\n",
"from open_atmos_jupyter_utils import show_plot\n",
@@ -37,19 +54,19 @@
"from PySDM import Formulae\n",
"from PySDM.physics import si\n",
"from PySDM_examples.Niedermeier_et_al_2014 import Settings, Simulation"
- ]
+ ],
+ "outputs": [],
+ "execution_count": 6
},
{
"cell_type": "code",
- "execution_count": 2,
"id": "c38109d8",
"metadata": {
"ExecuteTime": {
- "end_time": "2024-02-01T07:40:48.125279Z",
- "start_time": "2024-02-01T07:40:28.323902Z"
+ "end_time": "2024-11-08T22:26:11.069207Z",
+ "start_time": "2024-11-08T22:26:00.491815Z"
}
},
- "outputs": [],
"source": [
"formulae = Formulae(\n",
" heterogeneous_ice_nucleation_rate='ABIFM',\n",
@@ -70,50 +87,56 @@
" )\n",
" simulation = Simulation(settings)\n",
" output.append(simulation.run())"
- ]
+ ],
+ "outputs": [],
+ "execution_count": 7
},
{
"cell_type": "code",
- "execution_count": 3,
"id": "a3df1ee0",
"metadata": {
"ExecuteTime": {
- "end_time": "2024-02-01T07:40:48.568676Z",
- "start_time": "2024-02-01T07:40:48.126341Z"
+ "end_time": "2024-11-08T22:26:11.357832Z",
+ "start_time": "2024-11-08T22:26:11.078327Z"
}
},
+ "source": [
+ "_, axs = pyplot.subplots(1, 2, figsize=(11, 5))\n",
+ "for i, ax in enumerate(axs):\n",
+ " ax.grid()\n",
+ " ax.plot(output[i]['ice water content'], convert_temperature(output[i]['T'], 'Kelvin', 'Celsius'))\n",
+ " ax.invert_yaxis()\n",
+ " ax.set_ylabel(r'Temperature [$^\\circ$C]')\n",
+ " ax.set_xlabel('TODO #832 (should be Frozen Fraction)')\n",
+ "show_plot('fig_2.pdf')"
+ ],
"outputs": [
{
"data": {
- "text/plain": "",
- "image/svg+xml": "\n\n\n"
+ "text/plain": [
+ ""
+ ],
+ "image/svg+xml": "\n\n\n"
},
"metadata": {},
"output_type": "display_data"
},
{
"data": {
- "text/plain": "HTML(value=\"./fig_2.pdf
\")",
+ "text/plain": [
+ "HBox(children=(HTML(value=\"./fig_2.pdf
\"), HTML(value=\""
+ ],
+ "image/svg+xml": "\n\n\n"
+ },
+ "metadata": {},
+ "output_type": "display_data"
+ },
+ {
+ "data": {
+ "text/plain": [
+ "HBox(children=(HTML(value=\"./fig6_Ec_sensitivity.pdf"
+ ],
+ "image/svg+xml": "\n\n\n"
+ },
+ "metadata": {},
+ "output_type": "display_data"
+ },
+ {
+ "data": {
+ "text/plain": [
+ "HBox(children=(HTML(value=\"./fig7_Pf_sensitivity_c…"
+ ],
+ "application/vnd.jupyter.widget-view+json": {
+ "version_major": 2,
+ "version_minor": 0,
+ "model_id": "704097d59f304dc7b83caee5143672a8"
+ }
+ },
+ "metadata": {},
+ "output_type": "display_data"
+ }
+ ],
+ "execution_count": 4
},
{
"cell_type": "markdown",
@@ -206,9 +393,12 @@
},
{
"cell_type": "code",
- "execution_count": null,
- "metadata": {},
- "outputs": [],
+ "metadata": {
+ "ExecuteTime": {
+ "end_time": "2024-11-08T22:13:00.021731Z",
+ "start_time": "2024-11-08T22:12:52.083917Z"
+ }
+ },
"source": [
"settings = Settings0D(fragmentation=Straub2010Nf(vmin=vmin, nfmax=nfmax))\n",
"settings._steps = [0, 60, 240, 1800, 7200] # pylint: disable=protected-access\n",
@@ -244,7 +434,34 @@
"pyplot.ylabel(\"dm/dlnr (kg/m$^3$)\")\n",
"pyplot.legend()\n",
"show_plot('fig8_straub_box.pdf')"
- ]
+ ],
+ "outputs": [
+ {
+ "data": {
+ "text/plain": [
+ ""
+ ],
+ "image/svg+xml": "\n\n\n"
+ },
+ "metadata": {},
+ "output_type": "display_data"
+ },
+ {
+ "data": {
+ "text/plain": [
+ "HBox(children=(HTML(value=\"./fig8_straub_box.pdf
\"), HT…"
+ ],
+ "application/vnd.jupyter.widget-view+json": {
+ "version_major": 2,
+ "version_minor": 0,
+ "model_id": "ef187d994d1b4316a79c41802fe5d79c"
+ }
+ },
+ "metadata": {},
+ "output_type": "display_data"
+ }
+ ],
+ "execution_count": 5
}
],
"metadata": {
diff --git a/examples/PySDM_examples/seeding/hello_world.ipynb b/examples/PySDM_examples/seeding/hello_world.ipynb
index 9f868178a..820850f22 100644
--- a/examples/PySDM_examples/seeding/hello_world.ipynb
+++ b/examples/PySDM_examples/seeding/hello_world.ipynb
@@ -1,5 +1,35 @@
{
"cells": [
+ {
+ "metadata": {},
+ "cell_type": "markdown",
+ "source": [
+ "[](https://github.com/open-atmos/PySDM/blob/main/examples/PySDM_examples/seeding/hello_world.ipynb) \n",
+ "[](https://mybinder.org/v2/gh/open-atmos/PySDM.git/main?urlpath=examples/PySDM_examples/seeding/hello_world.ipynb) \n",
+ "[](https://colab.research.google.com/github/open-atmos/PySDM/blob/main/examples/PySDM_examples/seeding/hello_world.ipynb)"
+ ],
+ "id": "b762c49560c8d6cf"
+ },
+ {
+ "metadata": {},
+ "cell_type": "markdown",
+ "source": "TODO #1417",
+ "id": "45491a3c0a12c30a"
+ },
+ {
+ "metadata": {},
+ "cell_type": "code",
+ "outputs": [],
+ "execution_count": null,
+ "source": [
+ "import sys\n",
+ "if 'google.colab' in sys.modules:\n",
+ " !pip --quiet install open-atmos-jupyter-utils\n",
+ " from open_atmos_jupyter_utils import pip_install_on_colab\n",
+ " pip_install_on_colab('PySDM-examples')"
+ ],
+ "id": "70162914d9301075"
+ },
{
"cell_type": "code",
"execution_count": 1,
diff --git a/examples/PySDM_examples/seeding/seeding_no_collisions.ipynb b/examples/PySDM_examples/seeding/seeding_no_collisions.ipynb
index 767074683..4813cbf6c 100644
--- a/examples/PySDM_examples/seeding/seeding_no_collisions.ipynb
+++ b/examples/PySDM_examples/seeding/seeding_no_collisions.ipynb
@@ -1,5 +1,32 @@
{
"cells": [
+ {
+ "metadata": {},
+ "cell_type": "markdown",
+ "source": [
+ "[](https://github.com/open-atmos/PySDM/blob/main/examples/PySDM_examples/seeding/seeding_no_collisions.ipynb) \n",
+ "[](https://mybinder.org/v2/gh/open-atmos/PySDM.git/main?urlpath=examples/PySDM_examples/seeding/seeding_no_collisions.ipynb) \n",
+ "[](https://colab.research.google.com/github/open-atmos/PySDM/blob/main/examples/PySDM_examples/seeding/seeding_no_collisions.ipynb)"
+ ]
+ },
+ {
+ "metadata": {},
+ "cell_type": "markdown",
+ "source": "TODO #1417"
+ },
+ {
+ "metadata": {},
+ "cell_type": "code",
+ "outputs": [],
+ "execution_count": null,
+ "source": [
+ "import sys\n",
+ "if 'google.colab' in sys.modules:\n",
+ " !pip --quiet install open-atmos-jupyter-utils\n",
+ " from open_atmos_jupyter_utils import pip_install_on_colab\n",
+ " pip_install_on_colab('PySDM-examples')"
+ ]
+ },
{
"cell_type": "code",
"execution_count": 1,
diff --git a/tutorials/collisions/collisions_playground.ipynb b/tutorials/collisions/collisions_playground.ipynb
index 2ee829155..4bda54f18 100644
--- a/tutorials/collisions/collisions_playground.ipynb
+++ b/tutorials/collisions/collisions_playground.ipynb
@@ -4,7 +4,7 @@
"cell_type": "markdown",
"metadata": {},
"source": [
- "[](https://github.com/open-atmos/PySDM/tree/main/tutorials/collisions/collisions_playground.ipynb) \n",
+ "[](https://github.com/open-atmos/PySDM/tree/main/tutorials/collisions/collisions_playground.ipynb) \n",
"[](https://mybinder.org/v2/gh/open-atmos/PySDM.git/main?urlpath=lab/tree/tutorials/collisions/collisions_playground.ipynb) \n",
"[](https://colab.research.google.com/github/open-atmos/PySDM/blob/main/tutorials/collisions/collisions_playground.ipynb)"
]
diff --git a/tutorials/condensation/condensation_playground.ipynb b/tutorials/condensation/condensation_playground.ipynb
index e82fa8b71..7aab243d8 100644
--- a/tutorials/condensation/condensation_playground.ipynb
+++ b/tutorials/condensation/condensation_playground.ipynb
@@ -4,7 +4,7 @@
"cell_type": "markdown",
"metadata": {},
"source": [
- "[](https://github.com/open-atmos/PySDM/tree/main/tutorials/condensation/condensation_playground.ipynb) \n",
+ "[](https://github.com/open-atmos/PySDM/tree/main/tutorials/condensation/condensation_playground.ipynb) \n",
"[](https://mybinder.org/v2/gh/open-atmos/PySDM.git/main?urlpath=lab/tree/tutorials/condensation/condensation_playground.ipynb) \n",
"[](https://colab.research.google.com/github/open-atmos/PySDM/blob/main/tutorials/condensation/condensation_playground.ipynb)"
]