Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Classes should be ecotype -> population -> metapopulation with MCMC sampling #58

Open
joethorley opened this issue Oct 19, 2021 · 4 comments

Comments

@joethorley
Copy link
Member

The base class should be an ecotype - which is one schedule with one SR
A population should consist of one or more ecotypes which have different schedules but the same SR
A meta population should consist of one ore more populations which have different SRs

In all cases the fish are indistinguishable by anglers and but experience the same exploitation rate for adults of a certain size.

Uncertainty should be handle by using distributions for the parameters with MCMC sampling.

@joethorley
Copy link
Member Author

this should likely be a new package ypr2

@joethorley
Copy link
Member Author

and weight and name should be properties of ecotypes (as well as populations in a metapopulation)

@joethorley
Copy link
Member Author

Arguable these parameters should be properties of populations not ecotypes

  check_same(x, "BH")
  check_same(x, "Rk")
  check_same(x, "tR")
  check_same(x, "Rmax")
  check_same(x, "pi")
  check_same(x, "Llo")
  check_same(x, "Lup")
  check_same(x, "rho")
  check_same(x, "q")

@joethorley
Copy link
Member Author

related issue of #62

Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Projects
None yet
Development

No branches or pull requests

2 participants