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entity "Type" in GO-export files #1134

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ValWood opened this issue Jan 29, 2024 · 1 comment

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ValWood commented Jan 29, 2024

PomBase has used "gene product" for 8 lncRNAs:

Screenshot 2024-01-29 at 15 55 46

could we change this to lncRNA?

from geneontology/amigo#713

ValWood assigned kimrutherford

cmungall commented Jan 29, 2024

pombase GAF is fine:

✗ curl -L -s https://www.pombase.org/data/annotations/Gene_ontology/gene_association.pombase.gz | gzip -dc | grep sme2 | cut -f12 | sort -u
lncRNA

The issue is with the GO pipeline:
geneontology/go-site#2246

ValWood closed this as completed

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