An open source whole slide scanner and automated cell discrimination and counting system. Check out the blog!
The 3D files are available via thingiverse (https://www.thingiverse.com/thing:3182595).
There a few tricks to get autoscope running on a RPi. We are using piwheels to install a precompiled version of cv2. Unfortunately, this restricts us to using python 3.5 on the RPi. Running the precompiled version of RPi requires a few packages to work. Install the requirements with the apt-get commands below. Once they are installed you can run pipenv install --dev --skip-lock in project the folder to install all the Pipfile packages.
sudo apt-get update
sudo apt-get ugrade
sudo apt install python3-dev
sudo apt install libhdf-dev
sudo apt install libharfbuzz0b-dev
sudo apt install libwebp6-dev
sudo apt install libjasper-dev
sudo apt install libilmbase-dev
sudo apt install libopenexr-dev
sudo apt install libgstreamer1.0-dev
sudo apt install libavcodec-dev
sudo apt install libavformat-dev
sudo apt install libswscale-dev
