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Ambiguous nucleotides treated literally by sequence_trim #69

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ChrisHIV opened this issue Mar 6, 2018 · 0 comments
Open

Ambiguous nucleotides treated literally by sequence_trim #69

ChrisHIV opened this issue Mar 6, 2018 · 0 comments

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@ChrisHIV
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ChrisHIV commented Mar 6, 2018

Ambiguous nucleotides are treated literally by sequence_trim. e.g. specifying AAAN to be trimmed will trim "AAAN" from sequence ends, but not "AAAA", "AAAC" etc. which is probably fair enough, but might warrant a warning message to the terminal in case the user is expecting ambiguity codes to be interpreted.
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