toc.yml

# This file contains the order and numbering for all sections in the book.
# _includes/sidebar.html renders this as a sidebar.
#
# Each entry has the following schema:
#
# title: Title of chapter or section
# url: URL of section. Use absolute URLs to link between pages
# class: (optional) a CSS class to add to this link
# sections: Contains chapter's sections
# not_numbered: true if the section shouldn't have a number in the sidebar
#   (e.g. Introduction or appendices)
# divider: true if this entry should just be rendered as a horizontal divider
#   in the sidebar. All other values are ignored.

- title: '<img src="/lab-wiki/images/search.svg" alt="Search The Site">'
  search: true
- title: Home
  url: /index
  not_numbered: true
- title: Orientation
  url: /orientation/index
  not_numbered: true
  expand_sections: false
  sections:
  - title: 5 minutes git
    url: /orientation/5m-git
    not_numbered: true
  - title: Use github issues
    url: /orientation/github-issues
    not_numbered: true
  - title: Debian based Linux setup
    url: /orientation/debian-setup
    not_numbered: true
  - title: Jupyter and SoS suite setup
    url: /orientation/jupyter-setup
    not_numbered: true

- title: Projects
  url: /project_resource/index
  not_numbered: true
  expand_sections: true
  sections:
  - title: Project repositories
    url: /project_resource/project
    not_numbered: true
  - title: Pipelines & workflows
    url: /project_resource/pipeline
    not_numbered: true

- title: Shared computing
  url: /shared_computing/index
  not_numbered: true
  expand_sections: true
  sections:
  - title: Data resources
    url: /shared_computing/data
    not_numbered: true
  - title: Sharing guidelines
    url: /shared_computing/sharing-guideline
    not_numbered: true
  - title: RCC Directories
    url: /shared_computing/rcc_directories
    not_numbered: true

##
- divider: true
- header: Resources

- title: Learning resource
  url: /learning_center/index
  not_numbered: true

- title: Research resource
  url: /research_resource/index
  not_numbered: true

- title: Productivity tips
  url: /productivity_tips/index
  not_numbered: true

- title: This and that
  url: /this_that/index
  not_numbered: true

##
- divider: true
- header: Tutorials

- title: Computing
  url: /computing_tutorial/index
  not_numbered: true
- title: Computational biology
  url: /compbio_tutorial/index
  not_numbered: true