Fixed install from github #4
Workflow file for this run
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| name: Linux | |
| on: | |
| workflow_dispatch: | |
| pull_request: | |
| push: | |
| branches: [master] | |
| concurrency: | |
| group: ${{ github.workflow }}-${{ github.job }}-${{ github.ref }} | |
| cancel-in-progress: true | |
| defaults: | |
| run: | |
| shell: bash -e -l {0} | |
| jobs: | |
| build: | |
| runs-on: ubuntu-20.04 | |
| name: ${{ matrix.sys.compiler }} ${{ matrix.sys.version }} | |
| strategy: | |
| fail-fast: false | |
| matrix: | |
| sys: | |
| - {compiler: gcc, version: '8'} | |
| - {compiler: gcc, version: '9'} | |
| - {compiler: gcc, version: '10'} | |
| - {compiler: gcc, version: '11'} | |
| - {compiler: clang, version: '15'} | |
| - {compiler: clang, version: '16'} | |
| steps: | |
| - name: Setup GCC | |
| if: ${{ matrix.sys.compiler == 'gcc' }} | |
| run: | | |
| GCC_VERSION=${{ matrix.sys.version }} | |
| sudo apt-get update | |
| sudo apt-get --no-install-suggests --no-install-recommends install g++-$GCC_VERSION | |
| CC=gcc-$GCC_VERSION | |
| echo "CC=$CC" >> $GITHUB_ENV | |
| CXX=g++-$GCC_VERSION | |
| echo "CXX=$CXX" >> $GITHUB_ENV | |
| - name: Setup clang | |
| if: ${{ matrix.sys.compiler == 'clang' }} | |
| run: | | |
| LLVM_VERSION=${{ matrix.sys.version }} | |
| wget -O - https://apt.llvm.org/llvm-snapshot.gpg.key | sudo apt-key add - || exit 1 | |
| if [[ $LLVM_VERSION -ge 13 ]]; then | |
| sudo add-apt-repository "deb http://apt.llvm.org/focal/ llvm-toolchain-focal-$LLVM_VERSION main" || exit 1 | |
| else | |
| sudo add-apt-repository "deb http://apt.llvm.org/focal/ llvm-toolchain-focal main" || exit 1 | |
| fi || exit 1 | |
| sudo apt-get update || exit 1 | |
| sudo apt-get --no-install-suggests --no-install-recommends install clang-$LLVM_VERSION || exit 1 | |
| sudo apt-get --no-install-suggests --no-install-recommends install g++-9 g++-9-multilib || exit 1 | |
| sudo ln -s /usr/include/asm-generic /usr/include/asm | |
| CC=clang-$LLVM_VERSION | |
| echo "CC=$CC" >> $GITHUB_ENV | |
| CXX=clang++-$LLVM_VERSION | |
| echo "CXX=$CXX" >> $GITHUB_ENV | |
| - name: Checkout code | |
| uses: actions/checkout@v3 | |
| - name: Set conda environment | |
| uses: mamba-org/setup-micromamba@v1 | |
| with: | |
| environment-file: environment-dev.yml | |
| cache-environment: true | |
| - name: Configure using CMake | |
| run: cmake -Bbuild -DDOWNLOAD_GTEST=ON -DCMAKE_INSTALL_PREFIX=$CONDA_PREFIX -DCMAKE_C_COMPILER=$CC -DCMAKE_CXX_COMPILER=$CXX $(Build.SourcesDirectory) | |
| - name: Install | |
| working-directory: build | |
| run: cmake --install . | |
| - name: Build | |
| working-directory: build | |
| run: cmake --build . --target test_xtensor_r --parallel 8 | |
| - name: Install R package | |
| working-directory: build | |
| env: | |
| GITHUB_PAT: ${{ secrets.GITHUB_TOKEN }} | |
| run: | | |
| echo "which tar" | |
| which tar | |
| export TAR="/usr/bin/tar" | |
| R -e "library(devtools); install_github('xtensor-stack/Xtensor.R', configure.args = '--novendor')" | |
| - name: Run tests (C++) | |
| working-directory: build/test | |
| run: ./test_xtensor_r | |
| - name: Run tests (R) | |
| working-directory: test | |
| run: | | |
| mkdir ~/.R | |
| touch ~/.R/Makevars | |
| echo "CXX14=$CXX" >> ~/.R/Makevars | |
| echo "CXX14FLAGS=-fPIC -O2" >> ~/.R/Makevars | |
| Rscript ./unittest.R | |