Add vadr_flagged to TheiaCov #32
HNHalsteadpytest-workflows.yml
on: push
Check for changes
7s
Matrix: check
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9 errors and 9 warnings
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wf_theiacov_fasta miniwdl
Process completed with exit code 1.
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wf_theiacov_fasta cromwell
EACCES: permission denied, scandir '/home/runner/pytest_workflow_htfxs5az/theiacov_fasta_cromwell/cromwell-executions/theiacov_fasta/0adb6c66-9454-4a8b-99d2-08ddf75c92ed/call-pangolin4/tmp.49914e1e/ompi.0d9ad9c0f640.0'
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wf_theiacov_fasta cromwell
Process completed with exit code 1.
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wf_theiacov_clearlabs miniwdl
Process completed with exit code 1.
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wf_theiacov_clearlabs cromwell
Process completed with exit code 1.
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wf_theiacov_illumina_se cromwell
Process completed with exit code 1.
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wf_theiacov_illumina_pe cromwell
Process completed with exit code 1.
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wf_theiacov_ont miniwdl
Process completed with exit code 1.
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wf_theiacov_ont cromwell
Process completed with exit code 1.
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Check for changes
Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: actions/checkout@v3, dorny/paths-filter@v2. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.
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wf_theiacov_fasta miniwdl
Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: actions/checkout@v3, actions/upload-artifact@v3. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.
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wf_theiacov_fasta cromwell
Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: actions/checkout@v3, actions/upload-artifact@v3. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.
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wf_theiacov_clearlabs miniwdl
Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: actions/checkout@v3, actions/upload-artifact@v3. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.
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wf_theiacov_clearlabs cromwell
Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: actions/checkout@v3, actions/upload-artifact@v3. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.
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wf_theiacov_illumina_se cromwell
Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: actions/checkout@v3, actions/upload-artifact@v3. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.
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wf_theiacov_illumina_pe cromwell
Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: actions/checkout@v3, actions/upload-artifact@v3. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.
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wf_theiacov_ont miniwdl
Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: actions/checkout@v3, actions/upload-artifact@v3. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.
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wf_theiacov_ont cromwell
Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: actions/checkout@v3, actions/upload-artifact@v3. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.
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Artifacts
Produced during runtime
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logs-cromwell
Expired
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9.17 MB |
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logs-miniwdl
Expired
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9.37 MB |
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