Update task_qc_check_phb.wdl

DOH-HNH0303 · Feb 1, 2024 · 8fd29a8 · 8fd29a8
1 parent e4663ed
commit 8fd29a8
Showing 1 changed file with 1 addition and 0 deletions.
diff --git a/tasks/quality_control/task_qc_check_phb.wdl b/tasks/quality_control/task_qc_check_phb.wdl
@@ -505,6 +505,7 @@ task qc_check_phb_waphl {
         if "~{est_coverage_raw}" and qc_check == "PASS":
             if float("~{est_coverage_raw}") < float(qc_check_df.loc["~{predicted_taxon}", "est_coverage_raw"]):
                 qc_check = "FAIL"
+                
         if "~{number_N}" and "~{number_Total}" and qc_check == "PASS":
             perc_N = int("~{number_N}")/int("~{number_Total}")
             if perc_N >= float(qc_check_df.loc["~{predicted_taxon}", "perc_N"]):