small error

DOH-JDJ0303 · Feb 6, 2024 · 25e3da1 · 25e3da1
1 parent 05aa846
commit 25e3da1
Showing 1 changed file with 1 addition and 1 deletion.
diff --git a/subworkflows/local/classify.nf b/subworkflows/local/classify.nf
@@ -137,7 +137,7 @@ workflow CLASSIFY {
         .ref_list
         .splitCsv(header: false, elem: 1)
         .map{ meta, ref -> [ meta, file(ref.get(0)).baseName ] }
-        .join(ch_refs.map{ meta, ref -> [ meta.id, params.mode == "accurate" ? file(ref.get(0)).baseName : meta.id, ref] }, by: 1)
+        .combine(ch_refs.map{ meta, ref -> [ meta.id, params.mode == "accurate" ? file(ref).baseName : meta.id, ref ] }, by: 1)
         .map{ index, meta, ref_id, ref -> [ meta, ref_id, ref ] }
         .set{ ch_ref_list }