modified validate-submission.yaml and appended after-validate-submiss…

…ion.yaml to invoke a workflow after merged PR data because a PR from forked repo cannot permit using secrets

.github/workflows/after-validate-submission.yaml

@@ -0,0 +1,49 @@
+name: After Validate Submission Workflow
+
+on:
+  workflow_run:
+    workflows: ["Validate Submission"]  # The name of the workflow we want to trigger from
+    types:
+      - completed
+
+jobs:
+  job1:
+    runs-on: ubuntu-latest
+    if: ${{ github.event.workflow_run.conclusion == 'success' }}
+    steps:
+      - name: Checkout
+        uses: actions/checkout@v2
+
+      - name: Checkout and push to another repository
+        uses: actions/checkout@v2
+        with:
+          repository: HopkinsIDD/rsv-forecast-hub_data
+          token: ${{ secrets.KJ3_PATC }}
+          path: ./rsv-forecast-hub_data
+          fetch-depth: 2
+
+      - name: Copy new files
+        run: |
+          FILES=$(git diff --name-only HEAD^ HEAD)
+          for FILE in $FILES
+          do
+            if [[ $FILE == model-output/* ]] || [[ $FILE == model-metadata/* ]]; then
+              mkdir -p ./rsv-forecast-hub_data/$(dirname $FILE)
+              cp $FILE ./rsv-forecast-hub_data/$FILE
+            fi
+          done
+
+      - name: Commit and push new files
+        run: |
+          cd ./rsv-forecast-hub_data
+          git config user.name "github-actions[bot]"
+          git config user.email "41898282+github-actions[bot]@users.noreply.github.com"
+          if [ -n "$(git status --porcelain)" ]; then
+            git add .
+            git commit -m "Upload new files to RSV data repo"
+            git push
+            echo "RSV data uploaded";
+          else
+            echo "no upload";
+          fi
+        shell: bash

.github/workflows/validate-submission.yaml

@@ -47,38 +47,4 @@ jobs:
           hubValidations::check_for_errors(v)
         shell: Rscript {0}
 
-      - name: Checkout and push to another repository
-        if: success()
-        uses: actions/checkout@v2
-        with:
-          repository: HopkinsIDD/rsv-forecast-hub_data
-          token: ${{ secrets.KJ3_PATC }}
-          path: ./rsv-forecast-hub_data
-          fetch-depth: 2
-
-      - name: Copy new files
-        run: |
-          FILES=$(git diff --name-only HEAD^ HEAD)
-          for FILE in $FILES
-          do
-            if [[ $FILE == model-output/* ]] || [[ $FILE == model-metadata/* ]]; then
-              mkdir -p ./rsv-forecast-hub_data/$(dirname $FILE)
-              cp $FILE ./rsv-forecast-hub_data/$FILE
-            fi
-          done
-
-      - name: Commit and push new files
-        run: |
-          cd ./rsv-forecast-hub_data
-          git config user.name "github-actions[bot]"
-          git config user.email "41898282+github-actions[bot]@users.noreply.github.com"
-          if [ -n "$(git status --porcelain)" ]; then
-            git add .
-            git commit -m "Upload new files to RSV data repo"
-            git push
-            echo "RSV data uploaded";
-          else
-            echo "no upload";
-          fi
-        shell: bash