-
Notifications
You must be signed in to change notification settings - Fork 419
New issue
Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.
By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.
Already on GitHub? Sign in to your account
Add Asymmetric Exponential Power Distribution #1808
Open
lukketotte
wants to merge
2
commits into
JuliaStats:master
Choose a base branch
from
lukketotte:master
base: master
Could not load branches
Branch not found: {{ refName }}
Loading
Could not load tags
Nothing to show
Loading
Are you sure you want to change the base?
Some commits from the old base branch may be removed from the timeline,
and old review comments may become outdated.
Open
Changes from all commits
Commits
Show all changes
2 commits
Select commit
Hold shift + click to select a range
File filter
Filter by extension
Conversations
Failed to load comments.
Loading
Jump to
Jump to file
Failed to load files.
Loading
Diff view
Diff view
There are no files selected for viewing
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
Original file line number | Diff line number | Diff line change |
---|---|---|
|
@@ -64,6 +64,7 @@ export | |
|
||
# distribution types | ||
Arcsine, | ||
AsymmetricExponentialPower, | ||
Bernoulli, | ||
BernoulliLogit, | ||
Beta, | ||
|
147 changes: 147 additions & 0 deletions
147
src/univariate/continuous/asymmetricexponentialpower.jl
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
Original file line number | Diff line number | Diff line change |
---|---|---|
@@ -0,0 +1,147 @@ | ||
""" | ||
AsymmetricExponentialPower(μ, σ, p₁, p₂, α) | ||
|
||
The *Asymmetric exponential power distribution*, with location `μ`, scale `σ`, left (`x < μ`) shape `p₁`, right (`x >= μ`) shape `p₂`, and skewness `α`, | ||
has the probability density function [1] | ||
```math | ||
f(x; \\mu, \\sigma, p_1, p_2, \\alpha) = | ||
\\begin{cases} | ||
\\frac{\\alpha}{\\alpha^*} \\frac{1}{\\sigma} K_{EP}(p_1) \\exp \\left\\{ - \\frac{1}{2p_1}\\Big| \\frac{x-\\mu}{\\alpha^* \\sigma} \\Big|^{p_1} \\right\\}, & \\text{if } x \\leq \\mu \\\\ | ||
\\frac{(1-\\alpha)}{(1-\\alpha^*)} \\frac{1}{\\sigma} K_{EP}(p_2) \\exp \\left\\{ - \\frac{1}{2p_2}\\Big| \\frac{x-\\mu}{(1-\\alpha^*) \\sigma} \\Big|^{p_2} \\right\\}, & \\text{if } x > \\mu | ||
\\end{cases}, | ||
``` | ||
Where ``K_{EP}(p) = 1/(2p^{1/p}\\Gamma(1+1/p_1))`` and | ||
```math | ||
\\alpha^* = \\frac{\\alpha K_{EP}(p_1)}{\\alpha K_{EP}(p_1) + (1-\\alpha) K_{EP}(p_2)} | ||
``` | ||
The asymmetric exponential power distribution (AEPD) the skewed exponential power distribution as special case (``p_1 = p_2``) and thus the | ||
Laplace, Normal, uniform, exponential power distribution, asymmetric Laplace and skew normal are also special cases. | ||
|
||
[1] Zhy, D. and V. Zinde-Walsh (2009). Properties and estimation of asymmetric exponential power distribution. _Journal of econometrics_, 148(1):86-96, 2009. | ||
|
||
```julia | ||
AsymmetricExponentialPower() # AEPD with location 0, scale 1 left shape 2, right shape 2, and skewness 0.5 (the standard normal distribution) | ||
AsymmetricExponentialPower(μ, σ, p₁, p₂ α) # AEPD with location μ, scale σ, left shape p₁, right shape p₂, and skewness α | ||
AsymmetricExponentialPower(μ, σ, p₁, p₂) # AEPD with location μ, scale σ, left shape p₁, right shape p₂, and skewness 0.5 (the exponential power distribution) | ||
AsymmetricExponentialPower(μ, σ) # AEPD with location μ, scale σ, left shape 2, right shape 2, and skewness 0.5 (the normal distribution) | ||
AsymmetricExponentialPower(μ) # AEPD with location μ, scale 1, left shape 2, right shape 2, and skewness 0.5 (the normal distribution) | ||
|
||
params(d) # Get the parameters, i.e. (μ, σ, p₁, p₂, α) | ||
shape(d) # Get the shape parameters, i.e. (p₁, p₂) | ||
location(d) # Get the location parameter, i.e. μ | ||
scale(d) # Get the scale parameter, i.e. σ | ||
``` | ||
""" | ||
struct AsymmetricExponentialPower{T <: Real} <: ContinuousUnivariateDistribution | ||
μ::T | ||
σ::T | ||
p₁::T | ||
p₂::T | ||
α::T | ||
AsymmetricExponentialPower{T}(μ::T, σ::T, p₁::T, p₂::T, α::T) where {T} = new{T}(μ, σ, p₁, p₂, α) | ||
end | ||
|
||
|
||
function AsymmetricExponentialPower(µ::T, σ::T, p₁::T, p₂::T, α::T; check_args::Bool=true) where {T <: Real} | ||
@check_args AsymmetricExponentialPower (σ, σ > zero(σ)) (p₁, p₁ > zero(p₁)) (p₂, p₂ > zero(p₂)) (α, zero(α) < α < one(α)) | ||
return AsymmetricExponentialPower{T}(µ, σ, p₁, p₂, α) | ||
end | ||
|
||
function AsymmetricExponentialPower(μ::Real, σ::Real, p₁::Real, p₂::Real, α::Real = 1//2; check_args::Bool=true) | ||
return AsymmetricExponentialPower(promote(μ, σ, p₁, p₂, α)...; check_args=check_args) | ||
end | ||
|
||
function AsymmetricExponentialPower(μ::Real, σ::Real; check_args::Bool=true) | ||
return AsymmetricExponentialPower(promote(μ, σ, 2, 2, 1//2)...; check_args=check_args) | ||
end | ||
|
||
AsymmetricExponentialPower(μ::Real=0) = AsymmetricExponentialPower(μ, 1, 2, 2, 1//2; check_args=false) | ||
|
||
@distr_support AsymmetricExponentialPower -Inf Inf | ||
|
||
### Conversions | ||
function Base.convert(::Type{AsymmetricExponentialPower{T}}, d::AsymmetricExponentialPower) where {T<:Real} | ||
AsymmetricExponentialPower{T}(T(d.μ), T(d.σ), T(d.p), T(d.α)) | ||
end | ||
Base.convert(::Type{AsymmetricExponentialPower{T}}, d::AsymmetricExponentialPower{T}) where {T<:Real} = d | ||
|
||
### Parameters | ||
@inline partype(::AsymmetricExponentialPower{T}) where {T<:Real} = T | ||
params(d::AsymmetricExponentialPower) = (d.μ, d.σ, d.p₁, d.p₂, d.α) | ||
location(d::AsymmetricExponentialPower) = d.μ | ||
shape(d::AsymmetricExponentialPower) = (d.p₁, d.p₂) | ||
scale(d::AsymmetricExponentialPower) = d.σ | ||
|
||
# log of Equation (4) of [1] | ||
|
||
### Statistics | ||
# Computes log K_{EP}(p), Zhy, D. and V. Zinde-Walsh (2009) | ||
function logK(p::Real) | ||
inv_p = inv(p) | ||
return -(logtwo + loggamma(inv_p) + ((1 - p) * log(p))/p) | ||
end | ||
|
||
# Equation (3) in Zhy, D. and V. Zinde-Walsh (2009) | ||
function αstar(α::Real, p₁::Real, p₂::Real) | ||
K1 = exp(logK(p₁)) | ||
K2 = exp(logK(p₂)) | ||
return α*K1 / (α*K1 + (1-α)*K2) | ||
end | ||
|
||
# Computes Equation 4 in Zhy, D. and V. Zinde-Walsh (2009) | ||
B(α::Real, p₁::Real, p₂::Real) = α*exp(logK(p₁)) + (1-α)*exp(logK(p₂)) | ||
|
||
#Calculates the kth central moment of the AEPD, Equation 14 in Zhy, D. and V. Zinde-Walsh (2009) | ||
function m_k(d::AsymmetricExponentialPower, k::Integer) | ||
_, σ, p₁, p₂, α = params(d) | ||
inv_p1, inv_p2 = inv(p₁), inv(p₂) | ||
H1 = k*log(p₁) + loggamma((1+k)*inv_p1) - (1+k)*loggamma(inv_p1) | ||
H2 = k*log(p₂) + loggamma((1+k)*inv_p2) - (1+k)*loggamma(inv_p2) | ||
return B(α, p₁, p₂)^(-k) * σ^k * ((-1)^k * α^(1+k)*exp(H1) + (1-α)^(1+k)*exp(H2)) | ||
end | ||
|
||
mean(d::AsymmetricExponentialPower) = d.α == 1//2 ? float(d.μ) : m_k(d, 1) + d.μ | ||
var(d::AsymmetricExponentialPower) = m_k(d, 2) - m_k(d, 1)^2 | ||
skewness(d::AsymmetricExponentialPower) = d.α == 1//2 ? float(zero(partype(d))) : m_k(d, 3) / (std(d))^3 | ||
kurtosis(d::AsymmetricExponentialPower) = m_k(d, 4)/var(d)^2 - 3 | ||
|
||
function logpdf(d::AsymmetricExponentialPower, x::Real) | ||
μ, σ, p₁, p₂, α = params(d) | ||
a, astar, inv_p, p = x < μ ? (α, αstar(α, p₁, p₂), inv(p₁), p₁) : (1 - α, 1-αstar(α, p₁, p₂), inv(p₂), p₂) | ||
return -(log(astar) - log(a) + logtwo + log(σ) + loggamma(inv_p) + ((1 - p) * log(p) + (abs(μ - x) / (2 * σ * astar))^p) / p) | ||
end | ||
|
||
function cdf(d::AsymmetricExponentialPower, x::Real) | ||
μ, σ, p₁, p₂, α = params(d) | ||
if x <= μ | ||
inv_p = inv(p₁) | ||
α * ccdf(Gamma(inv_p), inv_p * (abs((x-μ)/σ) / (2*αstar(α, p₁, p₂)))^p₁) | ||
else | ||
inv_p = inv(p₂) | ||
α + (1-α) * cdf(Gamma(inv_p), inv_p * (abs((x-μ)/σ) / (2*(1-αstar(α, p₁, p₂))))^p₂) | ||
end | ||
end | ||
|
||
function quantile(d::AsymmetricExponentialPower, p::Real) | ||
μ, σ, p₁, p₂, α = params(d) | ||
if p <= α | ||
inv_p = inv(p₁) | ||
μ - 2*αstar(α, p₁, p₂)*σ * (p₁ * quantile(Gamma(inv_p), (α-p)/α))^inv_p | ||
else | ||
inv_p = inv(p₂) | ||
μ + 2*(1-αstar(α, p₁, p₂))*σ * (p₂ * quantile(Gamma(inv_p), (p-α)/(1-α)))^inv_p | ||
end | ||
end | ||
|
||
function rand(rng::AbstractRNG, d::AsymmetricExponentialPower) | ||
μ, σ, p₁, p₂, α = params(d) | ||
if rand(rng) < α | ||
inv_p = inv(p₁) | ||
z = 2*σ * (p₁ * rand(rng,Gamma(inv_p, 1)))^inv_p | ||
return μ - αstar(α,p₁,p₂) * z | ||
else | ||
inv_p = inv(p₂) | ||
z = 2*σ * (p₂ * rand(rng,Gamma(inv_p, 1)))^inv_p | ||
return μ + (1-αstar(α,p₁,p₂)) * z | ||
end | ||
end |
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
Original file line number | Diff line number | Diff line change |
---|---|---|
@@ -0,0 +1,90 @@ | ||
using Distributions | ||
using SpecialFunctions | ||
|
||
using Test | ||
|
||
@testset "AsymmetricExponentialPower" begin | ||
@testset "p₁ = p₂" begin | ||
@testset "α = 0.5" begin | ||
@test_throws DomainError AsymmetricExponentialPower(0, 0, 0, 0, 0) | ||
d1 = AsymmetricExponentialPower(0, 1, 1, 1, 0.5f0) | ||
@test @inferred partype(d1) == Float32 | ||
d2 = AsymmetricExponentialPower(0, 1, 1, 1, 0.5) | ||
@test @inferred partype(d2) == Float64 | ||
@test @inferred params(d2) == (0., 1., 1., 1., 0.5) | ||
@test @inferred cdf(d2, Inf) == 1 | ||
@test @inferred cdf(d2, -Inf) == 0 | ||
@test @inferred quantile(d2, 1) == Inf | ||
@test @inferred quantile(d2, 0) == -Inf | ||
test_distr(d2, 10^6) | ||
|
||
# Comparison to SEPD | ||
d = AsymmetricExponentialPower(0, 1, 1, 1, 0.5) | ||
dl = SkewedExponentialPower(0, 1, 1, 0.5) | ||
@test @inferred mean(d) ≈ mean(dl) | ||
@test @inferred var(d) ≈ var(dl) | ||
@test @inferred skewness(d) ≈ skewness(dl) | ||
@test @inferred kurtosis(d) ≈ kurtosis(dl) | ||
@test @inferred pdf(d, 0.5) ≈ pdf(dl, 0.5) | ||
@test @inferred cdf(d, 0.5) ≈ cdf(dl, 0.5) | ||
@test @inferred quantile(d, 0.5) ≈ quantile(dl, 0.5) | ||
|
||
# Comparison to laplace | ||
d = AsymmetricExponentialPower(0, 1, 1, 1, 0.5) | ||
dl = Laplace(0, 1) | ||
@test @inferred mean(d) ≈ mean(dl) | ||
@test @inferred var(d) ≈ var(dl) | ||
@test @inferred skewness(d) ≈ skewness(dl) | ||
@test @inferred kurtosis(d) ≈ kurtosis(dl) | ||
@test @inferred pdf(d, 0.5) ≈ pdf(dl, 0.5) | ||
@test @inferred cdf(d, 0.5) ≈ cdf(dl, 0.5) | ||
@test @inferred quantile(d, 0.5) ≈ quantile(dl, 0.5) | ||
|
||
# comparison to exponential power distribution (PGeneralizedGaussian), | ||
# where the variance is reparametrized as σₚ = p^(1/p)σ to ensure equal pdfs | ||
p = 1.2 | ||
d = AsymmetricExponentialPower(0, 1, p, p, 0.5) | ||
de = PGeneralizedGaussian(0, p^(1/p), p) | ||
@test @inferred mean(d) ≈ mean(de) | ||
@test @inferred var(d) ≈ var(de) | ||
@test @inferred skewness(d) ≈ skewness(de) | ||
@test @inferred kurtosis(d) ≈ kurtosis(de) | ||
@test @inferred pdf(d, 0.5) ≈ pdf(de, 0.5) | ||
@test @inferred cdf(d, 0.5) ≈ cdf(de, 0.5) | ||
test_distr(d, 10^6) | ||
end | ||
|
||
@testset "α != 0.5" begin | ||
# relationship between aepd(μ, σ, p, p, α) and | ||
# aepd(μ, σ, p, p, 1-α) | ||
d1 = AsymmetricExponentialPower(0, 1, 0.1, 0.1, 0.7) | ||
d2 = AsymmetricExponentialPower(0, 1, 0.1, 0.1, 0.3) | ||
@inferred -mean(d1) ≈ mean(d2) | ||
@inferred var(d1) ≈ var(d2) | ||
@inferred -skewness(d1) ≈ skewness(d2) | ||
@inferred kurtosis(d1) ≈ kurtosis(d2) | ||
|
||
α, p = rand(2) | ||
d = SkewedExponentialPower(0, 1, p, α) | ||
# moments of the standard SEPD, Equation 18 in Zhy, D. and V. Zinde-Walsh (2009) | ||
moments = [(2*p^(1/p))^k * ((-1)^k*α^(1+k) + (1-α)^(1+k)) * gamma((1+k)/p)/gamma(1/p) for k ∈ 1:4] | ||
|
||
@inferred var(d) ≈ moments[2] - moments[1]^2 | ||
@inferred skewness(d) ≈ moments[3] / (√(moments[2] - moments[1]^2))^3 | ||
@inferred kurtosis(d) ≈ (moments[4] / ((moments[2] - moments[1]^2))^2 - 3) | ||
test_distr(d, 10^6) | ||
end | ||
end | ||
@testset "p₁ ≠ p₂" begin | ||
d2 = AsymmetricExponentialPower(0, 1., 1., 1., 0.7) | ||
test_distr(d2, 10^6) | ||
|
||
# relationship between aepd(0, σ, p₁, p₂, α) and aepd(0, σ, p₂, p₁, 1-α) | ||
d1 = AsymmetricExponentialPower(0, 1., 0.4, 1.2, 0.7) | ||
d2 = AsymmetricExponentialPower(0, 1., 1.2, 0.4, 0.3) | ||
@inferred -mean(d1) ≈ mean(d2) | ||
@inferred var(d1) ≈ var(d2) | ||
@inferred -skewness(d1) ≈ skewness(d2) | ||
@inferred kurtosis(d1) ≈ kurtosis(d2) | ||
end | ||
end |
Oops, something went wrong.
Add this suggestion to a batch that can be applied as a single commit.
This suggestion is invalid because no changes were made to the code.
Suggestions cannot be applied while the pull request is closed.
Suggestions cannot be applied while viewing a subset of changes.
Only one suggestion per line can be applied in a batch.
Add this suggestion to a batch that can be applied as a single commit.
Applying suggestions on deleted lines is not supported.
You must change the existing code in this line in order to create a valid suggestion.
Outdated suggestions cannot be applied.
This suggestion has been applied or marked resolved.
Suggestions cannot be applied from pending reviews.
Suggestions cannot be applied on multi-line comments.
Suggestions cannot be applied while the pull request is queued to merge.
Suggestion cannot be applied right now. Please check back later.
There was a problem hiding this comment.
Choose a reason for hiding this comment
The reason will be displayed to describe this comment to others. Learn more.
No intention here, must've added it by mistake