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Updated conditional statement for fastsurfer container
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rcruces committed Aug 9, 2023
1 parent d3f2d90 commit 6f5fc17
Showing 1 changed file with 1 addition and 1 deletion.
2 changes: 1 addition & 1 deletion functions/01_proc-surf.sh
Original file line number Diff line number Diff line change
Expand Up @@ -130,7 +130,7 @@ elif [[ "$surfdir" == "FALSE" ]]; then ((N++))
Note "PROC" "$PROC"
if [[ "$recon" == "fastsurfer" ]]; then
Do_cmd mkdir -p "${dir_surf}/${idBIDS}"
if [[ ${PROC} == "container_micapipe-v0.2.0" ]]; then
if [[ ${PROC} == "container_micapipe-v0.2.2" ]]; then
Info "FastSurfer: running fastsurfer_cpu environment"
source activate fastsurfer_cpu
Note "conda" "$(conda info --env | grep '*' | awk -F '*' '{print $2}')"
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