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Got the optimization running, with some other additions #367

Got the optimization running, with some other additions

Got the optimization running, with some other additions #367

Workflow file for this run

name: MISO Tests
on: [push]
env:
CMAKE_VERSION: 3.21.1
NINJA_VERSION: 1.10.2
CCACHE_VERSION: 4.4
jobs:
build:
name: ${{ matrix.config.name }}
runs-on: ${{ matrix.config.os }}
env:
BUILD_TYPE: ${{ matrix.config.buildtype }}
BUILD_FLAGS: ${{ matrix.config.buildflags}}
TEST_FLAGS: ${{ matrix.config.testflags}}
strategy:
fail-fast: false
matrix:
config:
- {
name: "Ubuntu Latest GCC (Release)", artifact: "Linux.tar.xz",
os: ubuntu-latest,
cc: "gcc", cxx: "g++",
buildtype: "Release",
buildflags: "-fno-openmp",
testflags: ""
}
- {
name: "Ubuntu Latest GCC (Debug)", artifact: "Linux.tar.xz",
os: ubuntu-latest,
cc: "gcc", cxx: "g++",
buildtype: "Debug",
buildflags: "-fno-openmp",
testflags: ""
}
- {
name: "Ubuntu Latest Clang (Debug)", artifact: "Linux.tar.xz",
os: ubuntu-22.04,
cc: "clang", cxx: "clang++",
buildtype: "Debug",
buildflags: "-fno-openmp",
testflags: ""
}
steps:
- name: Download Ninja
id: cmake_and_ninja
shell: cmake -P {0}
run: |
set(cmake_version $ENV{CMAKE_VERSION})
set(ninja_version $ENV{NINJA_VERSION})
message(STATUS "Using host CMake version: ${CMAKE_VERSION}")
if ("${{ runner.os }}" STREQUAL "Linux")
set(ninja_suffix "linux.zip")
set(cmake_suffix "linux-x86_64.tar.gz")
set(cmake_dir "cmake-${cmake_version}-linux-x86_64/bin")
elseif ("${{ runner.os }}" STREQUAL "macOS")
set(ninja_suffix "mac.zip")
set(cmake_suffix "macos-universal.tar.gz")
set(cmake_dir "cmake-${cmake_version}-macos-universal/CMake.app/Contents/bin")
endif()
set(ninja_url "https://github.com/ninja-build/ninja/releases/download/v${ninja_version}/ninja-${ninja_suffix}")
file(DOWNLOAD "${ninja_url}" ./ninja.zip SHOW_PROGRESS)
execute_process(COMMAND ${CMAKE_COMMAND} -E tar xvf ./ninja.zip)
set(cmake_url "https://github.com/Kitware/CMake/releases/download/v${cmake_version}/cmake-${cmake_version}-${cmake_suffix}")
file(DOWNLOAD "${cmake_url}" ./cmake.zip SHOW_PROGRESS)
execute_process(COMMAND ${CMAKE_COMMAND} -E tar xvf ./cmake.zip)
# Add to PATH environment variable
file(TO_CMAKE_PATH "$ENV{GITHUB_WORKSPACE}/${cmake_dir}" cmake_dir)
set(path_separator ":")
file(APPEND "$ENV{GITHUB_PATH}" "$ENV{GITHUB_WORKSPACE}${path_separator}${cmake_dir}")
execute_process(
COMMAND chmod +x ninja
COMMAND chmod +x ${cmake_dir}/cmake
)
- name: Download OpenMPI
id: openmpi
run: sudo apt-get install openmpi-bin openmpi-common openmpi-doc libopenmpi-dev
- name: Download Metis
id: metis
run: brew install metis
# run: sudo apt-get install metis libmetis-dev
- name: Download ccache
id: ccache
# run: sudo apt-get install ccache
run: brew install ccache
- name: Prepare ccache timestamp
id: ccache_cache_timestamp
shell: cmake -P {0}
run: |
string(TIMESTAMP current_date "%Y-%m-%d-%H;%M;%S" UTC)
message("::set-output name=timestamp::${current_date}")
- name: ccache cache files
uses: actions/[email protected]
with:
path: .ccache
key: ${{ matrix.config.name }}-ccache-${{ steps.ccache_cache_timestamp.outputs.timestamp }}
restore-keys: |
${{ matrix.config.name }}-ccache-
- name: Download Adept
uses: actions/checkout@v2
with:
repository: 'rjhogan/Adept-2'
path: .deps/adept
- name: Configure Adept
run: |
cd ${GITHUB_WORKSPACE}/.deps/adept/
autoreconf -i
./configure --prefix="${GITHUB_WORKSPACE}/.deps/adept/install" \
--with-blas=blas \
--with-lapack=lapack \
--disable-openmp \
CC="ccache ${{matrix.config.cc}}" \
CXX="ccache ${{matrix.config.cxx}}" \
- name: Build Adept
run: |
cd ${GITHUB_WORKSPACE}/.deps/adept/
CC="ccache ${{matrix.config.cc}}" CXX="ccache ${{matrix.config.cxx}}" make -j 2
# CC="ccache ${{matrix.config.cc}}" CXX="ccache ${{matrix.config.cxx}}" make check
make install
- name: Download Hypre
uses: actions/checkout@v2
with:
repository: 'hypre-space/hypre'
ref: 'v2.20.0'
path: .deps/hypre
- name: Create Hypre Build Environment
run: cmake -E make_directory ${GITHUB_WORKSPACE}/.deps/hypre/src/build
- name: Configure Hypre
shell: cmake -P {0}
run: |
set(ENV{CC} ${{ matrix.config.cc }})
set(ENV{CXX} ${{ matrix.config.cxx }})
set(path_separator ":")
set(ENV{PATH} "$ENV{GITHUB_WORKSPACE}${path_separator}$ENV{PATH}")
execute_process(
COMMAND cmake
-S $ENV{GITHUB_WORKSPACE}/.deps/hypre/src
-B $ENV{GITHUB_WORKSPACE}/.deps/hypre/src/build
-D CMAKE_BUILD_TYPE=$ENV{BUILD_TYPE}
-G Ninja
-D CMAKE_MAKE_PROGRAM=ninja
-D CMAKE_C_COMPILER_LAUNCHER=ccache
-D CMAKE_CXX_COMPILER_LAUNCHER=ccache
-D CMAKE_POSITION_INDEPENDENT_CODE=ON
-D CMAKE_INSTALL_PREFIX=$ENV{GITHUB_WORKSPACE}/.deps/hypre
RESULT_VARIABLE result
)
if (NOT result EQUAL 0)
message(FATAL_ERROR "Bad exit status")
endif()
- name: Build Hypre
shell: cmake -P {0}
run: |
set(ENV{NINJA_STATUS} "[%f/%t %o/sec] ")
file(TO_CMAKE_PATH "$ENV{GITHUB_WORKSPACE}" ccache_basedir)
set(ENV{CCACHE_BASEDIR} "${ccache_basedir}")
set(ENV{CCACHE_DIR} "${ccache_basedir}/.ccache")
set(ENV{CCACHE_COMPRESS} "true")
set(ENV{CCACHE_COMPRESSLEVEL} "6")
set(ENV{CCACHE_MAXSIZE} "1000M")
if ("${{ matrix.config.cxx }}" STREQUAL "cl")
set(ENV{CCACHE_MAXSIZE} "1000M")
endif()
execute_process(COMMAND ccache -p)
execute_process(COMMAND ccache -z)
execute_process(
COMMAND cmake --build $ENV{GITHUB_WORKSPACE}/.deps/hypre/src/build
RESULT_VARIABLE result
OUTPUT_VARIABLE output
ERROR_VARIABLE output
ECHO_OUTPUT_VARIABLE ECHO_ERROR_VARIABLE
)
if (NOT result EQUAL 0)
string(REGEX MATCH "FAILED:.*$" error_message "${output}")
string(REPLACE "\n" "%0A" error_message "${error_message}")
message("::error::${error_message}")
message(FATAL_ERROR "Build failed")
endif()
- name: Install Hypre
run: cmake --build ${GITHUB_WORKSPACE}/.deps/hypre/src/build --config $BUILD_TYPE --target install
- name: Download MFEM
uses: actions/checkout@v2
with:
repository: 'mfem/mfem'
ref: 'odl'
path: .deps/mfem
- name: Create MFEM Build Environment
run: cmake -E make_directory ${GITHUB_WORKSPACE}/.deps/mfem/build
- name: Configure MFEM
shell: cmake -P {0}
run: |
set(ENV{CC} ${{ matrix.config.cc }})
set(ENV{CXX} ${{ matrix.config.cxx }})
set(path_separator ":")
set(ENV{PATH} "$ENV{GITHUB_WORKSPACE}${path_separator}$ENV{PATH}")
execute_process(
COMMAND brew --prefix metis
OUTPUT_VARIABLE metis-dir
)
execute_process(
COMMAND cmake
-S $ENV{GITHUB_WORKSPACE}/.deps/mfem/
-B $ENV{GITHUB_WORKSPACE}/.deps/mfem/build
-D CMAKE_BUILD_TYPE=$ENV{BUILD_TYPE}
-G Ninja
-D CMAKE_MAKE_PROGRAM=ninja
-D CMAKE_C_COMPILER_LAUNCHER=ccache
-D CMAKE_CXX_COMPILER_LAUNCHER=ccache
-D CMAKE_POSITION_INDEPENDENT_CODE=ON
-D MFEM_USE_MPI=YES
-D MFEM_USE_METIS_5=YES
-D HYPRE_DIR=$ENV{GITHUB_WORKSPACE}/.deps/hypre
-D METIS_DIR=/home/linuxbrew/.linuxbrew/opt/metis
-D MFEM_ENABLE_EXAMPLES=NO
-D MFEM_ENABLE_MINIAPPS=NO
RESULT_VARIABLE result
)
if (NOT result EQUAL 0)
message(FATAL_ERROR "Bad exit status")
endif()
- name: Build MFEM
shell: cmake -P {0}
run: |
set(ENV{NINJA_STATUS} "[%f/%t %o/sec] ")
file(TO_CMAKE_PATH "$ENV{GITHUB_WORKSPACE}" ccache_basedir)
set(ENV{CCACHE_BASEDIR} "${ccache_basedir}")
set(ENV{CCACHE_DIR} "${ccache_basedir}/.ccache")
set(ENV{CCACHE_COMPRESS} "true")
set(ENV{CCACHE_COMPRESSLEVEL} "6")
set(ENV{CCACHE_MAXSIZE} "1000M")
if ("${{ matrix.config.cxx }}" STREQUAL "cl")
set(ENV{CCACHE_MAXSIZE} "1000M")
endif()
execute_process(
COMMAND cmake --build $ENV{GITHUB_WORKSPACE}/.deps/mfem/build
RESULT_VARIABLE result
OUTPUT_VARIABLE output
ERROR_VARIABLE output
ECHO_OUTPUT_VARIABLE ECHO_ERROR_VARIABLE
)
if (NOT result EQUAL 0)
string(REGEX MATCH "FAILED:.*$" error_message "${output}")
string(REPLACE "\n" "%0A" error_message "${error_message}")
message("::error::${error_message}")
message(FATAL_ERROR "Build failed")
endif()
- name: Clone MISO
uses: actions/checkout@v2
with:
path: miso
- name: Create MISO Build Environment
run: cmake -E make_directory ${GITHUB_WORKSPACE}/miso/build
- name: Configure MISO
shell: cmake -P {0}
run: |
set(ENV{CC} ${{ matrix.config.cc }})
set(ENV{CXX} ${{ matrix.config.cxx }})
set(path_separator ":")
set(ENV{PATH} "$ENV{GITHUB_WORKSPACE}${path_separator}$ENV{PATH}")
execute_process(
COMMAND cmake
-S miso
-B miso/build
-D CMAKE_BUILD_TYPE=$ENV{BUILD_TYPE}
-G Ninja
-D CMAKE_MAKE_PROGRAM=ninja
-D CMAKE_C_COMPILER_LAUNCHER=ccache
-D CMAKE_CXX_COMPILER_LAUNCHER=ccache
-D CMAKE_POSITION_INDEPENDENT_CODE=ON
-D CMAKE_CXX_FLAGS="$ENV{BUILD_FLAGS}"
-D Adept_ROOT=$ENV{GITHUB_WORKSPACE}/.deps/adept/install
-D MFEM_DIR=$ENV{GITHUB_WORKSPACE}/.deps/mfem/build
RESULT_VARIABLE result
)
if (NOT result EQUAL 0)
message(FATAL_ERROR "Bad exit status")
endif()
- name: Build MISO
shell: cmake -P {0}
run: |
set(ENV{NINJA_STATUS} "[%f/%t %o/sec] ")
file(TO_CMAKE_PATH "$ENV{GITHUB_WORKSPACE}" ccache_basedir)
set(ENV{CCACHE_BASEDIR} "${ccache_basedir}")
set(ENV{CCACHE_DIR} "${ccache_basedir}/.ccache")
set(ENV{CCACHE_COMPRESS} "true")
set(ENV{CCACHE_COMPRESSLEVEL} "6")
set(ENV{CCACHE_MAXSIZE} "1000M")
if ("${{ matrix.config.cxx }}" STREQUAL "cl")
set(ENV{CCACHE_MAXSIZE} "1000M")
endif()
# execute_process(COMMAND ccache -p)
# execute_process(COMMAND ccache -z)
execute_process(
COMMAND cmake --build miso/build
RESULT_VARIABLE result
OUTPUT_VARIABLE output
ERROR_VARIABLE output
ECHO_OUTPUT_VARIABLE ECHO_ERROR_VARIABLE
)
if (NOT result EQUAL 0)
string(REGEX MATCH "FAILED:.*$" error_message "${output}")
string(REPLACE "\n" "%0A" error_message "${error_message}")
message("::error::${error_message}")
message(FATAL_ERROR "Build failed")
endif()
- name: Build MISO Tests
shell: cmake -P {0}
run: |
set(ENV{NINJA_STATUS} "[%f/%t %o/sec] ")
file(TO_CMAKE_PATH "$ENV{GITHUB_WORKSPACE}" ccache_basedir)
set(ENV{CCACHE_BASEDIR} "${ccache_basedir}")
set(ENV{CCACHE_DIR} "${ccache_basedir}/.ccache")
set(ENV{CCACHE_COMPRESS} "true")
set(ENV{CCACHE_COMPRESSLEVEL} "6")
set(ENV{CCACHE_MAXSIZE} "1000M")
if ("${{ matrix.config.cxx }}" STREQUAL "cl")
set(ENV{CCACHE_MAXSIZE} "1000M")
endif()
# execute_process(COMMAND ccache -p)
# execute_process(COMMAND ccache -z)
execute_process(
COMMAND cmake --build miso/build --target build_tests
RESULT_VARIABLE result
OUTPUT_VARIABLE output
ERROR_VARIABLE output
ECHO_OUTPUT_VARIABLE ECHO_ERROR_VARIABLE
)
if (NOT result EQUAL 0)
string(REGEX MATCH "FAILED:.*$" error_message "${output}")
string(REPLACE "\n" "%0A" error_message "${error_message}")
message("::error::${error_message}")
message(FATAL_ERROR "Build failed")
endif()
- name: Test MISO
working-directory: miso/build
shell: bash
run: ctest --output-on-failure
- name: ccache statistics
shell: cmake -P {0}
run: |
file(TO_CMAKE_PATH "$ENV{GITHUB_WORKSPACE}" ccache_basedir)
set(ENV{CCACHE_BASEDIR} "${ccache_basedir}")
set(ENV{CCACHE_DIR} "${ccache_basedir}/.ccache")
execute_process(COMMAND ccache -s)