Dump info about installed packages #24
Workflow file for this run
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| name: Benchmarks | |
| on: | |
| push: | |
| branches: | |
| - main | |
| pull_request: | |
| branches: | |
| - '*' | |
| workflow_dispatch: # allows to trigger manually | |
| schedule: | |
| - cron: "0 5 * * 4" # Once a week at 0500 on Thursday | |
| # Sets permissions of the GITHUB_TOKEN to allow writing back to `master` | |
| permissions: | |
| contents: write | |
| pages: write | |
| id-token: write | |
| # Allow only one concurrent deployment, skipping runs queued between the run in-progress and latest queued. | |
| # Cancel in-progress deployment jobs so only the latest one succeeds. | |
| concurrency: | |
| group: "pages" | |
| cancel-in-progress: true | |
| env: | |
| MACHINE_NAME: gcp-n1-standard-8 | |
| jobs: | |
| run-benchmarks: | |
| runs-on: "cirun-benchmark-runner--${{ github.run_id }}" | |
| steps: | |
| # Install git first; otherwise actions/checkout silently falls back | |
| # to github REST API for downloading the repo | |
| - name: Install dependencies | |
| run: | | |
| sudo apt update -y | |
| sudo apt install git zlib1g-dev build-essential pkg-config rsync lsof -y | |
| - uses: actions/checkout@v4 | |
| with: | |
| repository: deshaw/versioned-hdf5 | |
| path: ./versioned-hdf5/ | |
| fetch-depth: 0 # Needed for asv to be able to run benchmarks on old commits | |
| - name: Get commit hash | |
| working-directory: ./versioned-hdf5 | |
| run: echo "PROJECT_SHA=$(git rev-parse HEAD)" >> $GITHUB_ENV | |
| - uses: actions/checkout@v4 | |
| with: | |
| path: ./versioned-hdf5-benchmarks/ | |
| - name: Setup python with miniconda | |
| uses: conda-incubator/setup-miniconda@v3 | |
| with: | |
| python-version: 3.11 | |
| channels: conda-forge | |
| - name: Install versioned-hdf5 | |
| working-directory: ./versioned-hdf5 | |
| run: | | |
| conda install -n test pip hdf5 openmpi h5py ndindex -c conda-forge -y | |
| conda run -n test pip install '.[bench]' | |
| - name: Dump conda environment | |
| run: conda list -n test | |
| - name: Print hdf5 configuration | |
| working-directory: ./versioned-hdf5-benchmarks | |
| run: | | |
| conda run -n test python -c 'import utils; utils.debug_libhdf5_so()' | |
| conda run -n test h5cc -showconfig | |
| - name: Run benchmarks | |
| working-directory: ./versioned-hdf5 | |
| run: | | |
| # Copy the old asv results back into ./versioned-hdf5 to avoid | |
| # running old benchmarks again | |
| rsync -r ../versioned-hdf5-benchmarks/.asv ./ | |
| # set the machine name; otherwise this is unique to each run | |
| echo "Setting machine name to $MACHINE_NAME" | |
| conda run -n test asv machine --machine $MACHINE_NAME --yes -v | |
| cat ~/.asv-machine.json | |
| # Don't return exit code 1 if results are slower | |
| conda run -n test asv run --skip-existing --machine $MACHINE_NAME 1.7.0.. || true; | |
| # Copy the new benchmark results to the benchmarks repo to commit them | |
| rsync -r .asv ../versioned-hdf5-benchmarks/ | |
| - name: Add and commit benchmarks | |
| uses: EndBug/add-and-commit@v9 | |
| with: | |
| cwd: ./versioned-hdf5-benchmarks | |
| add: .asv/ | |
| message: "Update benchmarks for commit ${{ env.PROJECT_SHA }}" | |
| - name: Generate html | |
| working-directory: ./versioned-hdf5 | |
| run: conda run -n test asv publish -o ./html | |
| - name: Setup Pages | |
| uses: actions/configure-pages@v5 | |
| - name: Upload artifact | |
| uses: actions/upload-pages-artifact@v3 | |
| with: | |
| path: ./versioned-hdf5/html | |
| retention-days: 30 | |
| - name: Deploy to GitHub Pages | |
| if: github.event_name != 'pull_request' | |
| id: deployment | |
| uses: actions/deploy-pages@v4 |