Resolve Yaml Parser exception (#877)

Fixes #876

pom.xml

@@ -6,7 +6,7 @@
 
   <groupId>com.sap.oss.phosphor</groupId>
   <artifactId>fosstars-rating-core</artifactId>
-  <version>1.12.0-SNAPSHOT</version>
+  <version>1.11.1-SNAPSHOT</version>
   <packaging>jar</packaging>
 
   <name>Fosstars Rating Core</name>

src/main/java/com/sap/oss/phosphor/fosstars/advice/oss/github/OssSecurityGithubAdvisor.java

@@ -42,4 +42,4 @@ public OssSecurityGithubAdvisor() {
         new SnykAdvisor(AdviceForGitHubContextFactory.INSTANCE),
         new GoSecAdvisor(AdviceForGitHubContextFactory.INSTANCE));
   }
-}
+}

src/main/java/com/sap/oss/phosphor/fosstars/data/AbstractStaticScanToolsDataProvider.java

@@ -432,7 +432,7 @@ public static class Visitor extends AbstractGitHubVisitor {
     @Override
     public void visitPreCommitHook(LocalRepository repository,
         Map<String, Predicate<String>> matchers, Set<Location> locations) throws IOException {
-      Optional<InputStream> content = repository.fileStream(PRE_COMMIT_HOOK_CONFIG);
+      Optional<InputStream> content = repository.read(PRE_COMMIT_HOOK_CONFIG);
       if (!content.isPresent()) {
         return;
       }

src/main/java/com/sap/oss/phosphor/fosstars/data/github/LocalRepository.java

@@ -213,37 +213,6 @@ public Optional<String> file(Path file) throws IOException {
       return Optional.of(IOUtils.toString(is, UTF_8));
     }
   }
-
-  /**
-   * Returns a content of a file if it exists.
-   *
-   * @param file The file name.
-   * @return A inputstream of the file.
-   * @throws IOException If something went wrong.
-   */
-  public Optional<InputStream> fileStream(String file) throws IOException {
-    Objects.requireNonNull(file, "On no! File name is null!");
-    return fileStream(Paths.get(file));
-  }
-
-  /**
-   * Returns a content of a file if it exists.
-   *
-   * @param file The file name.
-   * @return A inputstream of the file.
-   * @throws IOException If something went wrong.
-   */
-  public Optional<InputStream> fileStream(Path file) throws IOException {
-    Objects.requireNonNull(file, "On no! File name is null!");
-    Path path = info.path().resolve(file);
-    if (!Files.isRegularFile(path)) {
-      return Optional.empty();
-    }
-
-    try (InputStream is = Files.newInputStream(path)) {
-      return Optional.ofNullable(is);
-    }
-  }
 
   /**
    * Checks if the repository has a specified directory.

src/main/java/com/sap/oss/phosphor/fosstars/data/github/UsesSnyk.java

@@ -103,4 +103,4 @@ private boolean hasSnykPolicy(LocalRepository repository) throws IOException {
     List<Path> snykPolicyFilePaths = repository.files(SNYK_FILE_PREDICATE);
     return !snykPolicyFilePaths.isEmpty();
   }
-}
+}

src/test/java/com/sap/oss/phosphor/fosstars/data/github/MyPyDataProviderTest.java

@@ -126,7 +126,7 @@ private void testPylintFileStreamCheck(String filename, InputStream content,
     Files.createDirectories(file.getParent());
     when(localRepository.hasDirectory(any(Path.class))).thenReturn(true);
     IOUtils.copy(content, Files.newOutputStream(file));
-    when(localRepository.fileStream(any(String.class)))
+    when(localRepository.read(any(String.class)))
         .thenReturn(Optional.of(Files.newInputStream(file)));
 
     MyPyDataProvider provider = new MyPyDataProvider(fetcher);

src/test/java/com/sap/oss/phosphor/fosstars/data/github/PylintDataProviderTest.java

@@ -199,7 +199,7 @@ private void testPylintFileStreamCheck(String filename, InputStream content,
     Files.createDirectories(file.getParent());
     when(localRepository.hasDirectory(any(Path.class))).thenReturn(true);
     IOUtils.copy(content, Files.newOutputStream(file));
-    when(localRepository.fileStream(any(String.class)))
+    when(localRepository.read(any(String.class)))
         .thenReturn(Optional.of(Files.newInputStream(file)));
 
     PylintDataProvider provider = new PylintDataProvider(fetcher);

src/test/resources/com/sap/oss/phosphor/fosstars/data/github/mypy-analysis-with-pre-commit-hook.yml

@@ -1,21 +1,59 @@
-fail_fast: true
-
+#
+# Licensed to the Apache Software Foundation (ASF) under one or more
+# contributor license agreements.  See the NOTICE file distributed with
+# this work for additional information regarding copyright ownership.
+# The ASF licenses this file to You under the Apache License, Version 2.0
+# (the "License"); you may not use this file except in compliance with
+# the License.  You may obtain a copy of the License at
+#
+#    http://www.apache.org/licenses/LICENSE-2.0
+#
+# Unless required by applicable law or agreed to in writing, software
+# distributed under the License is distributed on an "AS IS" BASIS,
+# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
+# See the License for the specific language governing permissions and
+# limitations under the License.
+#
 repos:
-  - repo: https://github.com/ambv/black
+  - repo: https://github.com/PyCQA/isort
+    rev: 5.9.3
+    hooks:
+      - id: isort
+  - repo: https://github.com/pre-commit/mirrors-mypy
+    rev: v0.941
+    hooks:
+      - id: mypy
+        additional_dependencies: [types-all]
+  - repo: https://github.com/peterdemin/pip-compile-multi
+    rev: v2.4.1
+    hooks:
+      - id: pip-compile-multi-verify
+  - repo: https://github.com/pre-commit/pre-commit-hooks
+    rev: v3.2.0
+    hooks:
+      - id: check-docstring-first
+      - id: check-added-large-files
+        exclude: \.(geojson)$
+      - id: check-yaml
+        exclude: ^helm/superset/templates/
+      - id: debug-statements
+      - id: end-of-file-fixer
+      - id: trailing-whitespace
+        args: ["--markdown-linebreak-ext=md"]
+  - repo: https://github.com/psf/black
     rev: 22.3.0
     hooks:
       - id: black
-        args: [--diff, --check]
-
-  - repo: https://github.com/pre-commit/mirrors-pylint
-    rev: v3.0.0a3
+        language_version: python3
+  - repo: https://github.com/pre-commit/mirrors-prettier
+    rev: v2.4.1 # Use the sha or tag you want to point at
     hooks:
-      - id: pylint
-        args: [--disable=all, --enable=unused-import]
-
-  - repo: https://github.com/pre-commit/mirrors-mypy
-    rev: v0.902
+      - id: prettier
+        args: ['--ignore-path=./superset-frontend/.prettierignore']
+        files: 'superset-frontend'
+  # blacklist unsafe functions like make_url (see #19526)
+  - repo: https://github.com/skorokithakis/blacklist-pre-commit-hook
+    rev: e2f070289d8eddcaec0b580d3bde29437e7c8221
     hooks:
-      - id: mypy
-        exclude: ^tests/
-        args: [--strict]
+      - id: blacklist
+        args: ["--blacklisted-names=make_url", "--ignore=tests/"]