Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Only offsetDimest works #198

Open
raacampbell opened this issue Mar 31, 2022 · 0 comments
Open

Only offsetDimest works #198

raacampbell opened this issue Mar 31, 2022 · 0 comments

Comments

@raacampbell
Copy link
Contributor

The other two offset types fail with tileLoad

                                                                                                                       >> buildSectionPreview                                                                                                  Thresholding at 6.00 times the mean of the area with brain                                                                                                                                                                                      Building main image with buildSectionPreview: section 85, opticalSection 1, all channels                                Recalculating offset: cached value requested but not found                                                              Loading tileStats..................                                                                                     Failed to find 4/85 tileStats.mat files                                                                                 Unable to resolve the name stitchit.tileLoad.loadBruteForceMeanAveFile.                                                                                                                                                                         Error in stitchit.tools.getOffset (line 107)                                                                                    aveTemplate = stitchit.tileLoad.loadBruteForceMeanAveFile(coords,userConfig);                                                                                                                                                           Error in tileLoad (line 272)                                                                                                offset = stitchit.tools.getOffset(coords);                                                                                                                                                                                                  Error in peekSection (line 118)                                                                                             [imStack,tileIndex,stagePos]=tileLoad([section,0,0,channel],'doIlluminationCorrection', doIlumCor);                                                                                                                                         Error in peekSection (line 71)                                                                                                      [imData{ii},im,tileIndex]=peekSection
Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Labels
None yet
Projects
None yet
Development

No branches or pull requests

1 participant