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High level constructor #90

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@radka-j radka-j commented Dec 10, 2024 •
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Closes #83

remaining TODOs:

  • docstrings !
  • go over net/summed functions in library
  • investigate why names(NamedArray) returns nested list (is this always the case, any edge cases?)
  • implement constructor from examples/emergent_4P/tracers.jl

@radka-j radka-j changed the base branch from main to emergent_params December 10, 2024 13:35
radka-j added 26 commits December 10, 2024 13:35
@radka-j
add tracers module
038a26d
@radka-j
bug fix
bb30927
@radka-j
fix P array names
d87e235
@radka-j
import NamedArrays
f7b74ce
@radka-j
placeholder docstrings
fa5befc
@radka-j
N2P2ZD placeholder test for updated tracer functions using NamedArrays
d0494ed
@radka-j
add example code, to be moved to library
834d83b
@radka-j
update tests
cb7c312
@radka-j
fix tracer expressions
c4d3990
@radka-j
formatting
b499dfb
@radka-j
use tracer module in example
2862437
@radka-j
rename test
9f3cc74
@radka-j
update docstring to match order of params
f880a31
@radka-j
export all functions in module
03e55b8
@radka-j
update tracer expressions to use function names from Agate.Library
bf92186
@radka-j
use Agate.Library functions in example
6287579
@radka-j
formatting
6bc80be
@radka-j
fix bugs in photosynthesis
d0933d2
@radka-j
rm phyto/zoo_dt functions
542a561
@radka-j
formatting
c82e380
@radka-j
mv net/summed functions to library
1d38caa
@radka-j
make library functions available in biogeochemistry module
dbfdcab
@radka-j
rm unnecessary functions
5142844
@radka-j
formatting
073411d
@radka-j
update names of sum/net functions
fcb71d2
@radka-j
use Agate.Library functions in example
a2a7023
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New high-level API for specifying models
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@radka-j