start to write codeql workflow

.github/codeql-ci-python-requirements.txt

@@ -0,0 +1,10 @@
+beautifulsoup4==4.12.3
+dill==0.3.8
+mpire==2.10.2
+pandas==2.0.3
+pymupdf==1.24.13
+python_gnupg==0.5.3
+Requests==2.32.3
+semantic_version==2.10.0
+tqdm==4.66.4
+tqdm==4.66.1

.github/dependabot.yml

@@ -16,58 +16,6 @@ updates:
         dependency-type: "all"
     rebase-strategy: "disabled"
   - package-ecosystem: "github-actions"
-    directories:
-      - "*"
-      - "**"
-    schedule:
-      interval: "daily"
-      day: "friday"
-      time: "10:00"
-      timezone: "Europe/Paris"
-    allow:
-      - dependency-name: "*"
-        dependency-type: "all"
-    rebase-strategy: "disabled"
-  - package-ecosystem: "npm"
-    directories:
-      - "*"
-      - "**"
-    schedule:
-      interval: "daily"
-      day: "friday"
-      time: "10:00"
-      timezone: "Europe/Paris"
-    allow:
-      - dependency-name: "*"
-        dependency-type: "all"
-    rebase-strategy: "disabled"
-  - package-ecosystem: "pip"
-    directories:
-      - "*"
-      - "**"
-    schedule:
-      interval: "daily"
-      day: "friday"
-      time: "10:00"
-      timezone: "Europe/Paris"
-    allow:
-      - dependency-name: "*"
-        dependency-type: "all"
-    rebase-strategy: "disabled"
-  - package-ecosystem: "terraform"
-    directories:
-      - "*"
-      - "**"
-    schedule:
-      interval: "daily"
-      day: "friday"
-      time: "10:00"
-      timezone: "Europe/Paris"
-    allow:
-      - dependency-name: "*"
-        dependency-type: "all"
-    rebase-strategy: "disabled"
-  - package-ecosystem: "docker"
     directories:
       - "*"
       - "**"

.github/workflows/codeql.yml.dont-use

@@ -0,0 +1,88 @@
+# For most projects, this workflow file will not need changing; you simply need
+# to commit it to your repository.
+#
+# You may wish to alter this file to override the set of languages analyzed,
+# or to provide custom queries or build logic.
+#
+# ******** NOTE ********
+# We have attempted to detect the languages in your repository. Please check
+# the `language` matrix defined below to confirm you have the correct set of
+# supported CodeQL languages.
+#
+name: "CodeQL Advanced"
+
+on:
+  push:
+    branches: [ "main" ]
+  pull_request:
+    branches: [ "main" ]
+  schedule:
+    - cron: '22 0 * * 6'
+
+jobs:
+  analyze:
+    name: Analyze (${{ matrix.language }})
+    # Runner size impacts CodeQL analysis time. To learn more, please see:
+    #   - https://gh.io/recommended-hardware-resources-for-running-codeql
+    #   - https://gh.io/supported-runners-and-hardware-resources
+    #   - https://gh.io/using-larger-runners (GitHub.com only)
+    # Consider using larger runners or machines with greater resources for possible analysis time improvements.
+    runs-on: ${{ (matrix.language == 'swift' && 'macos-latest') || 'ubuntu-latest' }}
+    permissions:
+      # required for all workflows
+      security-events: write
+
+      # required to fetch internal or private CodeQL packs
+      packages: read
+
+      # only required for workflows in private repositories
+      actions: read
+      contents: read
+
+    strategy:
+      fail-fast: false
+      matrix:
+        include:
+        - language: c-cpp
+          build-mode: manual
+    steps:
+    - name: Checkout repository
+      uses: actions/checkout@v4
+
+    # Initializes the CodeQL tools for scanning.
+    - name: Initialize CodeQL
+      uses: github/codeql-action/init@v3
+      with:
+        languages: ${{ matrix.language }}
+        build-mode: ${{ matrix.build-mode }}
+        # If you wish to specify custom queries, you can do so here or in a config file.
+        # By default, queries listed here will override any specified in a config file.
+        # Prefix the list here with "+" to use these queries and those in the config file.
+
+        # For more details on CodeQL's query packs, refer to: https://docs.github.com/en/code-security/code-scanning/automatically-scanning-your-code-for-vulnerabilities-and-errors/configuring-code-scanning#using-queries-in-ql-packs
+        # queries: security-extended,security-and-quality
+
+    # If the analyze step fails for one of the languages you are analyzing with
+    # "We were unable to automatically build your code", modify the matrix above
+    # to set the build mode to "manual" for that language. Then modify this step
+    # to build your code.
+    # ℹ️ Command-line programs to run using the OS shell.
+    # 📚 See https://docs.github.com/en/actions/using-workflows/workflow-syntax-for-github-actions#jobsjob_idstepsrun
+    - name: 'Setup python'
+      if: matrix.build-mode == 'manual' && matrix.language == 'c-cpp'
+      shell: bash
+    - name: 'Build project'
+      if: matrix.build-mode == 'manual' && matrix.language == 'c-cpp'
+      shell: bash
+      run: |
+        echo 'If you are using a "manual" build mode for one or more of the' \
+          'languages you are analyzing, replace this with the commands to build' \
+          'your code, for example:'
+        echo '  make bootstrap'
+        echo '  make release'
+        exit 1
+
+    - name: Perform CodeQL Analysis
+      uses: github/codeql-action/analyze@v3
+      with:
+        category: "/language:${{matrix.language}}"

.github/workflows/dependency-review-alt.yml.dont-use

@@ -0,0 +1,152 @@
+
+name: 'Dependency review'
+on:
+  push:
+    branches:
+      - "main"
+      - "**/dev/**"
+      - "release/**"
+  pull_request:
+    branches: 
+      - "main"
+      - "**/dev/**"
+      - "release/**"
+    types:
+      - opened
+      - synchronize
+      - reopened
+      - ready_for_review
+  workflow_dispatch:
+    inputs:
+      # Associated to `allow-licenses` or `deny-licenses` workflow options
+      license-selection:
+        description: 'Select the licenses to deny or allow'
+        required: true
+        type: string
+        default: 'GPL-1.0-or-later, LGPL-2.0-or-later'
+      # Describes what the previous selection will do
+      license-action:
+        description: 'Select the action to take on the selected licenses'
+        required: true
+        type: choice
+        default: deny
+        options:
+          - deny
+          - allow
+      # Associated to `fail-on-severity` workflow option
+      severity-selection:
+        description: 'Select the severity level to fail on'
+        required: true
+        type: choice
+        default: low
+        options:
+          - low
+          - moderate
+          - high
+          - critical
+      # Associated to `warn-only` workflow option
+      warn-only:
+        description: 'Only warn about the issues without failing the workflow'
+        required: true
+        type: boolean
+        default: false
+      # Associated to `fail-on-scopes` workflow option
+      scopes:
+        description: 'Select the scopes to run the action on'
+        required: true
+        type: choice
+        options:
+          - runtime
+          - development
+          - unknown
+        default: runtime
+
+permissions:
+  contents: read
+  # Write permissions for pull-requests are required for using the `comment-summary-in-pr` option, comment out if you aren't using this option
+  pull-requests: write
+
+env:
+  HEAD_REF: ${{ github.event.ref }}
+  BASE_REF: ${{ (github.event.base_ref != null) && github.event.base_ref || github.event.ref }}
+  IS_PR: ${{ contains(github.event_name, 'pull_request') }}
+  IS_PUSH: ${{ contains(github.event_name, 'push') }}
+  IS_MANUAL: ${{ contains(github.event_name, 'workflow_dispatch') }}
+
+jobs:
+  check-must-run:
+    runs-on: ubuntu-latest
+    if: ${{ contains(github.event_name, 'pull_request') || contains(github.event_name, 'push') }}
+    outputs:
+      must-run: ${{ steps.check-must-run-output-step.outputs.must-run }}
+    steps:
+      - name: 'Checkout repository'
+        uses: actions/checkout@v4
+      - name: 'Set up python'
+        uses: actions/setup-python@v5
+        with:
+          python-version: '3.13'
+          cache: 'pip'
+      - name: 'Install dependencies'
+        run: 'pip3 install -r ./.github/ci-check-must-run/requirements.txt'
+      - name: 'Shall we run the workflow ?'
+        id: check-must-run-output-step
+        working-directory: './'
+        run: './scripts/ci-check-must-run.py'
+  dependency-review-on-pr:
+    needs: check-must-run
+    runs-on: ubuntu-latest
+    if: ${{ contains(github.event_name, 'pull_request') && needs.check-must-run.outputs.must-run == 'true' }}
+    steps:
+      - name: 'Checkout repository'
+        uses: actions/checkout@v4
+      - name: 'Dependency Review'
+        uses: actions/dependency-review-action@v4
+        with:
+          comment-summary-in-pr: always
+          fail-on-severity: low
+          deny-licenses: GPL-1.0-or-later, LGPL-2.0-or-later
+  dependency-review-on-push:
+    needs: check-must-run
+    runs-on: ubuntu-latest
+    if: ${{ contains(github.event_name, 'push') && needs.check-must-run.outputs.must-run == 'true' }}
+    steps:
+      - name: 'Checkout repository'
+        uses: actions/checkout@v4
+      - name: 'Dependency Review'
+        uses: actions/dependency-review-action@v4
+        with:
+          fail-on-severity: low
+          deny-licenses: GPL-1.0-or-later, LGPL-2.0-or-later
+          base-ref: ${{ env.BASE_REF }}
+          head-ref: ${{ env.HEAD_REF }}
+  dependency-review-manual-with-allow-licenses:
+    runs-on: ubuntu-latest
+    if: ${{ (contains(github.event_name, 'workflow_dispatch') && inputs['license-action'] == 'allow') }}
+    steps:
+      - name: 'Checkout repository'
+        uses: actions/checkout@v4
+      - name: 'Dependency Review'
+        uses: actions/dependency-review-action@v4
+        with:
+          fail-on-severity: ${{ inputs['severity-selection'] }}
+          allow-licenses: ${{ inputs['license-selection'] }}
+          warn-only: ${{ inputs['warn-only'] }}
+          fail-on-scopes: ${{ inputs['scopes'] }}
+          base-ref: ${{ env.BASE_REF }}
+          head-ref: ${{ env.HEAD_REF }}
+  dependency-review-manual-with-deny-licenses:
+    runs-on: ubuntu-latest
+    if: ${{ (contains(github.event_name, 'workflow_dispatch') && inputs['license-action'] == 'deny') }}
+    steps:
+      - name: 'Checkout repository'
+        uses: actions/checkout@v4
+      - name: 'Dependency Review'
+        uses: actions/dependency-review-action@v4
+        with:
+          fail-on-severity: ${{ inputs['severity-selection'] }}
+          deny-licenses: ${{ inputs['license-selection'] }}
+          warn-only: ${{ inputs['warn-only'] }}
+          fail-on-scopes: ${{ inputs['scopes'] }}
+          base-ref: ${{ env.BASE_REF }}
+          head-ref: ${{ env.HEAD_REF }}

.github/workflows/dependency-review.yml

@@ -2,7 +2,7 @@
 name: 'Dependency review'
 on:
   push:
-    branches: 
+    branches:
       - "main"
       - "**/dev/**"
       - "release/**"

.gitignore

@@ -16,3 +16,5 @@ config-temp/**
 *.fdb_latexmk
 *.fls
 *.out
+
+!.github/codeql-ci-python-requirements.txt