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Update gorules_test_errors.gaf
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pgaudet authored Oct 5, 2023
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Expand Up @@ -61,6 +61,8 @@ UniProtKB O76187 darA enables GO:0005488 PMID:9802899 IPI UniProtKB:P34149 F GOR
UniProtKB Q4KA26 PFL_3807 is_active_in GO:0016020 GO_REF:0000015 ND C GORULE:0000011-1 Putative membrane protein PFL_3807 protein taxon:220664 20090717 JCVI
! FAILS GORULE:0000011 - TEST 2 - fails because the evidence code is not ND, even if the GO ID one of GO:0003674, GO:0008150 or GO:0005575.
UniProtKB Q4KA26 PFL_3807 is_active_in GO:0005575 GO_REF:0000015 IDA C GORULE:0000011-2 Putative membrane protein PFL_3807 protein taxon:220664 20090717 JCVI
! SHOULD PASS GORULE:0000011 - TEST 3 -- is failing on snapshot 2023-10-05
UniProtKB Q6UW15 REG3G involved_in GO:0044278 PMID:16931762 IDA P GORULE:0000011-3 Regenerating islet-derived protein 3-gamma REG3G|PAP1B|UNQ429/PRO162 protein taxon:9606|taxon:1334565 20220606 UniProt `
! FAILS GORULE:0000013 - fails because GO:0075342 should not be annotated for human gene products - cannot be tested in ontobio parser (not a line-by-line check)
UniProtKB P67870 CSNK2B involved_in GO:0075342 PMID:20719947 IDA P GORULE:0000013-1 Casein kinase II subunit beta CSNK2B|CK2N|G5A protein taxon:9606 20230307 UniProt
! FAILS GORULE:0000015 - TEST 1 - GO:0005886 plasma membrane is not a child of "GO:0018995 host cellular component"
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