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Update gorules_test_errors.gaf
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pgaudet authored Oct 6, 2023
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Showing 1 changed file with 2 additions and 4 deletions.
6 changes: 2 additions & 4 deletions docs/gorules_test_errors.gaf
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Expand Up @@ -79,10 +79,8 @@ UniProtKB Q9HC96 CAPN10 involved_in GO:0006921 GO_REF:0000036 IC P GORULE:00000
UniProtKB Q9HC96 CAPN10 involved_in GO:0006921 GO_REF:0000036 IDA GO:0004198|GO:0008092 P GORULE:0000017-1 Calpain-10 CAPN10,KIAA1845 protein taxon:9606 20140213 BHF-UCL
! FAILS GORULE:0000018 - TEST 1 - column 8 (with/from) is null for IPI annotation to 'protein binding ; GO:0005515'
UniProtKB A0A0K3AV08 mlk-1 enables GO:0005080 PMID:23072806 IPI F GORULE:0000018-1 Mitogen-activated protein kinase kinase kinase mlk-1 mlk-1,K11D12.10 protein taxon:6239 20170322 UniProt
! FAILS GORULE:0000018 - TEST 2 - 'protein binding ; GO:0005515' annotation not using IPI
UniProtKB Q8IY33 MICALL2 enables GO:0005515 PMID:23072807 IDA F GORULE:0000018-2 MICAL-like protein 2 JRAB protein taxon:9606 20170322 UniProt
! FAILS GORULE:0000018 - TEST 3 - missing Column 8 data ('with' field) for 'binding ; GO:0005488'
UniProtKB O76187 darA GO:0005488 PMID:9802899 IPI UniProtKB:Q23862 F GORULE:0000018-3 protein taxon:44689 20230513 IntAct
! FAILS GORULE:0000018 - TEST 2 - missing Column 8 data ('with' field) for 'binding ; GO:0005488'
UniProtKB A0A0K3AV08 mlk-1 enables GO:0005080 PMID:23072806 IPI F GORULE:0000018-2 Mitogen-activated protein kinase kinase kinase mlk-1 mlk-1,K11D12.10 protein taxon:6239 20170322 UniProt
! FAILS GORULE:0000020 - TEST 1 - obsolete term with no replacement
UniProtKB P04995 sbcB involved_in GO:0090503 GO_REF:0000108 IEA GO:0000175 P GORULE:0000020-1 Exodeoxyribonuclease I sbcB|cpeA|xonA|JW1993|b2011 protein taxon:83333 20230509 GOC
! FAILS GORULE:0000020 - TEST 2 - obsolete term with a replacement term
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