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@gifford-lab

Gifford Lab, MIT CSAIL

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  1. Keras-genomics Keras-genomics Public

    Perform hyper-parameter tuning, training, testing and prediction with Keras

    Python 44 19

  2. prescient prescient Public

    Codebase for PRESCIENT (Potential eneRgy undErlying Single Cell gradIENTs) for generative modeling of single-cell time-series.

    Python 44 7

  3. antibody-2019 antibody-2019 Public

    Python 32 13

  4. optivax optivax Public

    OpenEdge ABL 22 8

  5. jupyter-docker-stacks jupyter-docker-stacks Public

    Forked from jupyter/docker-stacks

    Opinionated stacks of ready-to-run Jupyter applications in Docker. Forked to add GPU capabilities.

    Makefile 19 12

  6. overinterpretation overinterpretation Public

    Code for Overinterpretation paper

    Jupyter Notebook 19 7

Repositories

Showing 10 of 58 repositories
  • MHC2-optimization Public Forked from zheng-dai/MHC2-optimization
    gifford-lab/MHC2-optimization’s past year of commit activity
    Jupyter Notebook 1 2 0 0 Updated Nov 19, 2024
  • prescient Public

    Codebase for PRESCIENT (Potential eneRgy undErlying Single Cell gradIENTs) for generative modeling of single-cell time-series.

    gifford-lab/prescient’s past year of commit activity
    Python 44 MIT 7 0 0 Updated Jun 25, 2024
  • counterselection Public

    counterselection

    gifford-lab/counterselection’s past year of commit activity
    Jupyter Notebook 0 0 0 0 Updated Jun 9, 2024
  • spatzie Public Forked from jhammelman/spatzie

    Identification of enriched motif pairs from chromatin interaction data

    gifford-lab/spatzie’s past year of commit activity
    R 1 GPL-3.0 3 0 0 Updated Feb 4, 2024
  • idr2d Public Forked from kkrismer/idr2d

    Irreproducible discovery rate for genomic interaction data

    gifford-lab/idr2d’s past year of commit activity
    R 2 3 0 0 Updated Feb 3, 2024
  • gifford-lab.github.io Public

    New group website.

    gifford-lab/gifford-lab.github.io’s past year of commit activity
    SCSS 0 MIT 0 0 0 Updated Jan 11, 2024
  • PIQ Public
    gifford-lab/PIQ’s past year of commit activity
    R 0 0 0 0 Updated Jan 10, 2024
  • overinterpretation Public

    Code for Overinterpretation paper

    gifford-lab/overinterpretation’s past year of commit activity
    Jupyter Notebook 19 MIT 7 1 3 Updated Jul 6, 2023
  • DiminishingReturns Public Forked from zheng-dai/DiminishingReturns

    Constrained Submodular Optimization

    gifford-lab/DiminishingReturns’s past year of commit activity
    Jupyter Notebook 1 1 0 0 Updated Apr 27, 2023
  • MIT-T-COVID-vaccine Public

    Code for MIT-T-COVID vaccine paper

    gifford-lab/MIT-T-COVID-vaccine’s past year of commit activity
    Jupyter Notebook 1 1 0 0 Updated Mar 31, 2023
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