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1. meningioma_collaborations meningioma_collaborations Public

2. meningioma_manuscript_Feb2024 meningioma_manuscript_Feb2024 Public

   This repository contains R scripts used by myself for the below mentioned manuscript.

   R

3. CaSpER_copynumberalterations_RNASeq CaSpER_copynumberalterations_RNASeq Public

   This repository contains code used to call copy number alterations in meningioma samples using RNA-Seq data

   R

4. DiffBind DiffBind Public

   DiffBind performs differential binding analysis. It was generated to be used with ChIP-Seq. I attempted using it with CUT&RUN data sets.

   R

5. hierarchical_clustering hierarchical_clustering Public

   Hierarchical cluster analysis using hclust function in R and visualizing as a heatmap.

   R

6. ChIPseeker ChIPseeker Public

   ChIPseeker was used to annotate CUT&RUN data ; to visualize peak coverage over chromosomes.

   R