Sim3 interface multicycle optimization#2350

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jluque-inl wants to merge 93 commits intoidaholab:develfrom jluque-inl:SIM3-Interface-Multicycle-Optimization

+2,981-682

Commits on Feb 19, 2023

NSGA-II implementation with properly printing optimal solutions at the iteration is completed.
JunyungKim
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Unnecessary changes in DataSet.py have been removed.
JunyungKim
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Unnecessary changes in DataSet.py have been removed.
JunyungKim
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Commits on Feb 22, 2023

ZDT test is added.
JunyungKim
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Commits on Feb 24, 2023

Commits on Mar 11, 2023

temporary fix, not the way I want
Jimmy-INL
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Commits on Mar 13, 2023

NSGA-II testing fiels (multiSum wConstratint and ZDT1) are added.
JunyungKim
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Commits on Mar 14, 2023

moving models, xmls, and trying to resolve GD after converting objective to a list
Jimmy-INL
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Commits on Mar 21, 2023

fixing simulated annealing to accept a list of objectives
Jimmy-INL
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Commits on Mar 22, 2023

Commits on Apr 1, 2023

making one mod in RAVENSAmpled
Jimmy-INL
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Commits on Apr 5, 2023

Commits on Apr 6, 2023

Commits on Apr 8, 2023

converting SimukateData.py to unix line endings
Jimmy-INL
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Commits on Apr 11, 2023

regolding to print all batches in MOO
Jimmy-INL
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Commits on Apr 12, 2023

Commits on Apr 13, 2023

Commits on Apr 18, 2023

removing unnecessary if statement, this needs revisiting
Jimmy-INL
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Commits on Apr 20, 2023

modifying reverting cycle length to its value not the inverse
Jimmy-INL
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Commits on Jun 12, 2023

simulateData updating cost model.
Kim
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Commits on Jul 15, 2023

minor change is made in ZDT1 test.
JunyungKim
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Commits on Jul 17, 2023

Merge branch 'enablingMinMaxList' of https://github.com/Jimmy-INL/raven into junyung-Jimmy-enablingMinMaxList
JunyungKim
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Commits on Jul 27, 2023

myConstraints for MultiSum is updated.
JunyungKim
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Commits on Aug 30, 2023

fitness data structure is changed from data xarray to dataSet. It works well with sinlge objective optimization.

Junyung Kim
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Junyung Kim
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Commits on Aug 31, 2023

single objective optimization works well with three different types of fitness. Now changes for multi-objective optimization are in need. Specially fitness values need to be replaced with objective…

Junyung Kim
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Junyung Kim
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Commits on Sep 4, 2023

NSGA-II improvement is in progress.

Junyung Kim
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Junyung Kim
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Commits on Sep 6, 2023

fitness-based NSGA-II is in progress. min-min is working well with tournament selection and feasibleFirst.

Junyung Kim
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Junyung Kim
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Commits on Sep 7, 2023

NSGA-II fitness-based rank and CD calcuration is completed. Temporary plotting of pareto frontier is also updated reflectig optimization objectives (min or mix).

Junyung Kim
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Junyung Kim
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Commits on Sep 10, 2023

minor bugs are fixed.

Junyung Kim
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Junyung Kim
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Commits on Sep 17, 2023

Every type of fitness is now working with newly updated GA interface (fitnes: Xarray array=> Xarray dataset) which is for handling multi-objective optimization. Regression tests passed except newly…

Junyung Kim
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Junyung Kim
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Commits on Sep 21, 2023

multi-objective optimization using invLinear and logistics now works.

Junyung Kim
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Junyung Kim
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constraint handling for single and multi objective optimization in _useRealization method is now separated and new methods called singleConstraint and multiConstraint are created to avoid if-else s…

Junyung Kim
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Junyung Kim
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Commits on Sep 25, 2023

1. If-else statement for survivorSelection in _useRealization is removed and cleaned. Still, some regression tests are failed due to different age at the final solution. 2. Code updates are on goin…

Junyung Kim
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Junyung Kim
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Commits on Sep 26, 2023

1. Mohammad's comments are reflected; 2. Unneccesary if-else statements for single/multi objective optimization in _useRealization are removed and cleaned; 3. Unnecessary commented lines in frontUt…

Junyung Kim
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Junyung Kim
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1. missing descriptions of self are added.

Junyung Kim
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Junyung Kim
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Commits on Oct 14, 2023

tournamentSelection method in parentSelectors.py is enhanced following the logic described in tutorialspoint. New node called kSelection is introduced to let users choose the number of chromosomes …
JunyungKim
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Commits on Oct 15, 2023

Commits on Feb 26, 2024

Junyung-Jimmy-enablingMinMaxList_vf_desk is merged to most-updated devel.

Junyung Kim
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Junyung Kim
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Commits on Mar 4, 2024

devel is merged with enabling MinMaxList_vf_desk.

Junyung Kim
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Junyung Kim
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Commits on Mar 6, 2024

Commits on Mar 20, 2024

Issues that RAVEN could not catch error when non-rankNCrowdingBased survivorSelector is used for multi-objective optimization have been solved.
JunyungKim
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Commits on Apr 2, 2024

Commits on May 23, 2024

contaminated HERON and TEAL is now back to RAVEN.

Junyung Kim
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Junyung Kim
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the branch, Junyung-Jimmy-NSGAII-ManualUpdate-DefectsFix, is now merged to up-to-date idaholab/devel branch.

Junyung Kim
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Junyung Kim
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trailing whitespaces are removed.

Junyung Kim
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Junyung Kim
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Issues created due to having objective variable type be List are partially fixed. No errors of BayesianOptimizer tests. Diff still exist.

Junyung Kim
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Junyung Kim
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MultiObjective_Beale-Bealeflipped is added.

Junyung Kim
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Junyung Kim
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Commits on Jul 18, 2024

[WIP] Crossover.py and GeneticAlgorithm.py have been modified to include Partially Mapped Crossover (Two Points)
jluque-inl
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Commits on Jul 19, 2024

Interface changes for multicycle optimization 7/18
jluque-inl
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Commits on Jul 31, 2024

RAVEN/SIM3 Interface updated to work with quarter rotational symmetry in nth cycle shuffling scheme optimization
jluque-inl
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Commits on Aug 6, 2024

Core average burnup extractor for nth cycle opt was added
jluque-inl
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Commits on Aug 16, 2024

Changes made to the interface for octant symmetry
jluque-inl
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