testing

omim2obo/config.py

@@ -1,14 +1,37 @@
+import os
 from pathlib import Path
 import yaml
 from dotenv import dotenv_values
 
 ROOT_DIR = Path(__file__).resolve().parent.parent
 DATA_DIR = ROOT_DIR / 'data'
+ENV_PATH = ROOT_DIR / '.env'
 
 with open(DATA_DIR / 'dipper/GLOBAL_TERMS.yaml') as file:
     GLOBAL_TERMS = yaml.safe_load(file)
 
 with open(DATA_DIR / 'dipper/curie_map.yaml') as file:
     CURIE_MAP = yaml.safe_load(file)
 
-config = dotenv_values(ROOT_DIR / '.env')
+config = dotenv_values(ENV_PATH)
+print('CONFIG')
+print(config)
+print('env path')
+print(ENV_PATH)
+print('ls root')
+print(os.listdir(ROOT_DIR))
+
+print('env contents')
+with open(ENV_PATH, 'r') as file:
+    lines = file.readlines()
+    for line in lines:
+        var, val = line.split('=')
+        config[var] = val
+    print(lines)
+print('CONFIG')
+print(config)
+
+# TODO: get this to work:
+print(str(config['API_KEY']))
+raise Exception('stop here')
+