Implemented func to get CUDA memory usage, implemented automatic,nonGUI version of MPI connection memory tests

.clang-format

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.clang-tidy

@@ -0,0 +1 @@
+Checks: '-*,modernize-use-nullptr,modernize-use-override,bugprone,modernize-redundant-void-arg'

.gitignore

@@ -39,4 +39,9 @@ doxygen
 python/test/log.txt
 python/Potjans_2014/data/
 python/Potjans_2014_tmp/data/
+python/mpi_mem_check/test_*.dat
+python/mpi_mem_check/req_mem_*.dat
+python/mpi_mem_check/full_*.dat
+python/mpi_mem_check/log*.txt
+python/mpi_mem_check/report.nsys-rep
 .vscode/

Makefile.am

@@ -12,17 +12,54 @@ CCLD = $(CC)
 LINK = $(CCLD) $(AM_CFLAGS) $(CFLAGS) $(AM_LDFLAGS) $(LDFLAGS) -o $@
 
 HCUSRC=\
+connect.h \
+conn12b.h \
+conn16b.h \
 remote_connect.h \
+connect_rules.h \
+connect_spec.h \
+nestgpu.h \
+get_spike.h \
+send_spike.h \
+rev_spike.h \
+spike_buffer.h \
+remote_spike.h \
+mpi_comm.h \
+base_neuron.h \
+node_group.h \
+neuron_models.h \
+poiss_gen.h \
+poiss_gen_variables.h \
+cuda_error.h \
+ngpu_exception.h \
+getRealTime.h \
+random.h \
 utilities.h \
 distribution.h \
+scan.h \
+prefix_scan.h \
+nested_loop.h \
 copass_kernels.h \
 copass_sort.h \
-connect.h \
-iaf_psc_exp_g.h \
-iaf_psc_exp_hc_params.h \
-iaf_psc_exp_hc.h \
-iaf_psc_exp.h \
+rk5_const.h \
+rk5.h \
+rk5_interface.h \
+propagate_error.h \
+propagator_stability.h \
+stdp.h \
+syn_model.h \
+test_syn_model.h \
+spike_detector.h \
+spike_generator.h \
+parrot_neuron.h \
+multimeter.h \
 ext_neuron.h \
+user_m1.h \
+user_m1_kernel.h \
+user_m1_rk5.h \
+user_m2.h \
+user_m2_kernel.h \
+user_m2_rk5.h \
 aeif_cond_alpha.h \
 aeif_cond_alpha_kernel.h \
 aeif_cond_alpha_multisynapse.h \
@@ -46,17 +83,6 @@ aeif_psc_exp_kernel.h \
 aeif_psc_exp_multisynapse.h \
 aeif_psc_exp_multisynapse_kernel.h \
 aeif_psc_exp_multisynapse_rk5.h \
-base_neuron.h \
-connect.h \
-connect_rules.h \
-connect_spec.h \
-copass_kernels.h \
-copass_sort.h \
-cuda_error.h \
-distribution.h \
-ext_neuron.h \
-getRealTime.h \
-get_spike.h \
 iaf_psc_exp_g.h \
 iaf_psc_exp.h \
 iaf_psc_exp_hc.h \
@@ -68,53 +94,46 @@ izhikevich_cond_beta_rk5.h \
 izhikevich.h \
 izhikevich_psc_exp_2s.h \
 izhikevich_psc_exp_5s.h \
-izhikevich_psc_exp.h \
-multimeter.h \
-nested_loop.h \
-nestgpu.h \
-neuron_models.h \
-ngpu_exception.h \
-node_group.h \
-parrot_neuron.h \
-poiss_gen.h \
-poiss_gen_variables.h \
-prefix_scan.h \
-propagate_error.h \
-propagator_stability.h \
-random.h \
-rev_spike.h \
-rk5_const.h \
-rk5.h \
-rk5_interface.h \
-scan.h \
-send_spike.h \
-spike_buffer.h \
-spike_detector.h \
-spike_generator.h \
-remote_spike.h \
-mpi_comm.h \
-stdp.h \
-syn_model.h \
-test_syn_model.h \
-user_m1.h \
-user_m1_kernel.h \
-user_m1_rk5.h \
-user_m2.h \
-user_m2_kernel.h \
-user_m2_rk5.h \
-utilities.h
+izhikevich_psc_exp.h
 
 CUSRC=\
+connect.cu \
+conn12b.cu \
+conn16b.cu \
 remote_connect.cu \
+connect_rules.cu \
+nestgpu.cu \
+get_spike.cu \
+send_spike.cu \
+rev_spike.cu \
+spike_buffer.cu \
+remote_spike.cu \
+mpi_comm.cu \
+base_neuron.cu \
+node_group.cu \
+neuron_models.cu \
+poiss_gen.cu \
+getRealTime.cu \
+random.cu \
 utilities.cu \
 distribution.cu \
+scan.cu \
+prefix_scan.cu \
+nested_loop.cu \
 copass_kernels.cu \
 copass_sort.cu \
-connect.cu \
-iaf_psc_exp_g.cu \
-iaf_psc_exp_hc.cu \
-iaf_psc_exp.cu \
+rk5.cu \
+propagator_stability.cu \
+stdp.cu \
+syn_model.cu \
+test_syn_model.cu \
+spike_detector.cu \
+spike_generator.cu \
+parrot_neuron.cu \
+multimeter.cu \
 ext_neuron.cu \
+user_m1.cu \
+user_m2.cu \
 aeif_cond_alpha.cu \
 aeif_cond_alpha_multisynapse.cu \
 aeif_cond_beta.cu \
@@ -124,15 +143,6 @@ aeif_psc_alpha_multisynapse.cu \
 aeif_psc_delta.cu \
 aeif_psc_exp.cu \
 aeif_psc_exp_multisynapse.cu \
-base_neuron.cu \
-connect.cu \
-connect_rules.cu \
-copass_kernels.cu \
-copass_sort.cu \
-distribution.cu \
-ext_neuron.cu \
-getRealTime.cu \
-get_spike.cu \
 iaf_psc_exp.cu \
 iaf_psc_exp_g.cu \
 iaf_psc_exp_hc.cu \
@@ -141,32 +151,8 @@ izhikevich_cond_beta.cu \
 izhikevich.cu \
 izhikevich_psc_exp_2s.cu \
 izhikevich_psc_exp_5s.cu \
-izhikevich_psc_exp.cu \
-multimeter.cu \
-nested_loop.cu \
-nestgpu.cu \
-neuron_models.cu \
-node_group.cu \
-parrot_neuron.cu \
-poiss_gen.cu \
-prefix_scan.cu \
-propagator_stability.cu \
-random.cu \
-rev_spike.cu \
-rk5.cu \
-scan.cu \
-send_spike.cu \
-spike_buffer.cu \
-spike_detector.cu \
-spike_generator.cu \
-remote_spike.cu \
-mpi_comm.cu \
-stdp.cu \
-syn_model.cu \
-test_syn_model.cu \
-user_m1.cu \
-user_m2.cu \
-utilities.cu
+izhikevich_psc_exp.cu
+
 
 HCPPSRC=\
 nestgpu_C.h

build_support/.clang-tidy-ignore

@@ -0,0 +1 @@
+*.cuh