Merge pull request #25 from neuromatch/nov-fix

November Cohort
neuromatch · Nov 18, 2024 · 5fbb45f · 5fbb45f
2 parents edb2361 + ebc2e73
commit 5fbb45f
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diff --git a/tutorials/W1D1_TheEthosOfOpenScience/W1D1_Tutorial1.ipynb b/tutorials/W1D1_TheEthosOfOpenScience/W1D1_Tutorial1.ipynb
@@ -306,7 +306,7 @@
    "source": [
     "### <span style = \"color: green\">Activity 1:</span> Think About the What and How of Open Science\n",
     "\n",
-    "*Estimated time for activity: 10 minutes*\n",
+    "*Estimated time for activity: 10 minutes. It is a group activity.*\n",
     "\n",
     "In this activity, reflect on your answers to the questions and discuss them in a group.\n",
     "\n",
@@ -770,7 +770,7 @@
    "source": [
     "### <span style = \"color: green\">Activity 2:</span> Self-Reflection on Open Science Concerns\n",
     "\n",
-    "*Estimated time for activity: 10 minutes*\n",
+    "*Estimated time for activity: 10 minutes. It is a group activity.*\n",
     "\n",
     "In this activity, reflect on the given topic and discuss your thoughts in a group.\n",
     "\n",
@@ -1155,7 +1155,7 @@
    "source": [
     "### <span style = \"color: green\">Activity 3:</span> Use, Make, Share\n",
     "\n",
-    "*Estimated time for activity: 10 minutes*\n",
+    "*Estimated time for activity: 10 minutes. It is a group activity.*\n",
     "\n",
     "Take a moment to answer the following questions on your current research or on research that you would like to do:\n",
     "\n",

diff --git a/tutorials/W1D1_TheEthosOfOpenScience/instructor/W1D1_Tutorial1.ipynb b/tutorials/W1D1_TheEthosOfOpenScience/instructor/W1D1_Tutorial1.ipynb
@@ -306,7 +306,7 @@
    "source": [
     "### <span style = \"color: green\">Activity 1:</span> Think About the What and How of Open Science\n",
     "\n",
-    "*Estimated time for activity: 10 minutes*\n",
+    "*Estimated time for activity: 10 minutes. It is a group activity.*\n",
     "\n",
     "In this activity, reflect on your answers to the questions and discuss them in a group.\n",
     "\n",
@@ -770,7 +770,7 @@
    "source": [
     "### <span style = \"color: green\">Activity 2:</span> Self-Reflection on Open Science Concerns\n",
     "\n",
-    "*Estimated time for activity: 10 minutes*\n",
+    "*Estimated time for activity: 10 minutes. It is a group activity.*\n",
     "\n",
     "In this activity, reflect on the given topic and discuss your thoughts in a group.\n",
     "\n",
@@ -1155,7 +1155,7 @@
    "source": [
     "### <span style = \"color: green\">Activity 3:</span> Use, Make, Share\n",
     "\n",
-    "*Estimated time for activity: 10 minutes*\n",
+    "*Estimated time for activity: 10 minutes. It is a group activity.*\n",
     "\n",
     "Take a moment to answer the following questions on your current research or on research that you would like to do:\n",
     "\n",

diff --git a/tutorials/W1D1_TheEthosOfOpenScience/student/W1D1_Tutorial1.ipynb b/tutorials/W1D1_TheEthosOfOpenScience/student/W1D1_Tutorial1.ipynb
@@ -306,7 +306,7 @@
    "source": [
     "### <span style = \"color: green\">Activity 1:</span> Think About the What and How of Open Science\n",
     "\n",
-    "*Estimated time for activity: 10 minutes*\n",
+    "*Estimated time for activity: 10 minutes. It is a group activity.*\n",
     "\n",
     "In this activity, reflect on your answers to the questions and discuss them in a group.\n",
     "\n",
@@ -770,7 +770,7 @@
    "source": [
     "### <span style = \"color: green\">Activity 2:</span> Self-Reflection on Open Science Concerns\n",
     "\n",
-    "*Estimated time for activity: 10 minutes*\n",
+    "*Estimated time for activity: 10 minutes. It is a group activity.*\n",
     "\n",
     "In this activity, reflect on the given topic and discuss your thoughts in a group.\n",
     "\n",
@@ -1155,7 +1155,7 @@
    "source": [
     "### <span style = \"color: green\">Activity 3:</span> Use, Make, Share\n",
     "\n",
-    "*Estimated time for activity: 10 minutes*\n",
+    "*Estimated time for activity: 10 minutes. It is a group activity.*\n",
     "\n",
     "Take a moment to answer the following questions on your current research or on research that you would like to do:\n",
     "\n",

diff --git a/tutorials/W1D2_OpenToolsAndResources/W1D2_Tutorial1.ipynb b/tutorials/W1D2_OpenToolsAndResources/W1D2_Tutorial1.ipynb
@@ -273,7 +273,7 @@
    "source": [
     "#### <span style = \"color: green\">Activity 1:</span> Find and Resolve a DOI\n",
     "\n",
-    "*Estimated time for activity: 5 minutes*\n",
+    "*Estimated time for activity: 5 minutes. It is an individual activity.*\n",
     "\n",
     "In this activity, you will search for a DOI for a data set or piece of software that you use, and you will then use the DOI website to “resolve” the DOI name. By \"resolving\", this means that you will be taken to the information about the product designated by that particular DOI.\n",
     "\n",
@@ -762,7 +762,7 @@
     "\n",
     "#### <span style = \"color:green\"> Activity 2:</span> Explore Zenodo and Sign Up!\n",
     "\n",
-    "*Estimated time for activity: 8 minutes*\n",
+    "*Estimated time for activity: 8 minutes. It is an individual activity.*\n",
     "\n",
     "The most popular repository at the moment is Zenodo. Review the following 4.5-minute video to get an overview of Zenodo and then sign up for an account. You can use your ORCID to sign up if you have one.\n",
     "\n",
@@ -1141,7 +1141,7 @@
     "\n",
     "#### <span style = \"color:green\">Activity 3:</span> Run a Jupyter Notebook Yourself from the Browser\n",
     "\n",
-    "*Estimated time for activity: 15 minutes*\n",
+    "*Estimated time for activity: 15 minutes. It is an individual activity.*\n",
     "\n",
     "Let's use an example from Project Pythia to showcase how computational notebooks can be used in science. Project Pythia is an education Hub for the geoscientific community. They have some great learning resources and example research notebooks that are developed and maintained by the community and are freely available.\n",
     "\n",
@@ -1344,7 +1344,7 @@
     "\n",
     "#### <span style = \"color: green\">Activity 4:</span> Identify an Open-Access Journal\n",
     "\n",
-    "*Estimated time for activity: 7 minutes*\n",
+    "*Estimated time for activity: 7 minutes. It is an individual activity.*\n",
     "\n",
     "To become more familiar with the [DOAJ](https://doaj.org/), visit [https://doaj.org/](https://doaj.org/) and search for *Frontiers in Computational Neuroscience* published by the American Astronomical Society. Once you select the journal, you can see costs to publish, details about licensing, author retention rights, time to publication, and other details.\n",
     "\n",

diff --git a/tutorials/W1D2_OpenToolsAndResources/instructor/W1D2_Tutorial1.ipynb b/tutorials/W1D2_OpenToolsAndResources/instructor/W1D2_Tutorial1.ipynb
@@ -273,7 +273,7 @@
    "source": [
     "#### <span style = \"color: green\">Activity 1:</span> Find and Resolve a DOI\n",
     "\n",
-    "*Estimated time for activity: 5 minutes*\n",
+    "*Estimated time for activity: 5 minutes. It is an individual activity.*\n",
     "\n",
     "In this activity, you will search for a DOI for a data set or piece of software that you use, and you will then use the DOI website to “resolve” the DOI name. By \"resolving\", this means that you will be taken to the information about the product designated by that particular DOI.\n",
     "\n",
@@ -762,7 +762,7 @@
     "\n",
     "#### <span style = \"color:green\"> Activity 2:</span> Explore Zenodo and Sign Up!\n",
     "\n",
-    "*Estimated time for activity: 8 minutes*\n",
+    "*Estimated time for activity: 8 minutes. It is an individual activity.*\n",
     "\n",
     "The most popular repository at the moment is Zenodo. Review the following 4.5-minute video to get an overview of Zenodo and then sign up for an account. You can use your ORCID to sign up if you have one.\n",
     "\n",
@@ -1141,7 +1141,7 @@
     "\n",
     "#### <span style = \"color:green\">Activity 3:</span> Run a Jupyter Notebook Yourself from the Browser\n",
     "\n",
-    "*Estimated time for activity: 15 minutes*\n",
+    "*Estimated time for activity: 15 minutes. It is an individual activity.*\n",
     "\n",
     "Let's use an example from Project Pythia to showcase how computational notebooks can be used in science. Project Pythia is an education Hub for the geoscientific community. They have some great learning resources and example research notebooks that are developed and maintained by the community and are freely available.\n",
     "\n",
@@ -1344,7 +1344,7 @@
     "\n",
     "#### <span style = \"color: green\">Activity 4:</span> Identify an Open-Access Journal\n",
     "\n",
-    "*Estimated time for activity: 7 minutes*\n",
+    "*Estimated time for activity: 7 minutes. It is an individual activity.*\n",
     "\n",
     "To become more familiar with the [DOAJ](https://doaj.org/), visit [https://doaj.org/](https://doaj.org/) and search for *Frontiers in Computational Neuroscience* published by the American Astronomical Society. Once you select the journal, you can see costs to publish, details about licensing, author retention rights, time to publication, and other details.\n",
     "\n",

diff --git a/tutorials/W1D2_OpenToolsAndResources/student/W1D2_Tutorial1.ipynb b/tutorials/W1D2_OpenToolsAndResources/student/W1D2_Tutorial1.ipynb
@@ -273,7 +273,7 @@
    "source": [
     "#### <span style = \"color: green\">Activity 1:</span> Find and Resolve a DOI\n",
     "\n",
-    "*Estimated time for activity: 5 minutes*\n",
+    "*Estimated time for activity: 5 minutes. It is an individual activity.*\n",
     "\n",
     "In this activity, you will search for a DOI for a data set or piece of software that you use, and you will then use the DOI website to “resolve” the DOI name. By \"resolving\", this means that you will be taken to the information about the product designated by that particular DOI.\n",
     "\n",
@@ -762,7 +762,7 @@
     "\n",
     "#### <span style = \"color:green\"> Activity 2:</span> Explore Zenodo and Sign Up!\n",
     "\n",
-    "*Estimated time for activity: 8 minutes*\n",
+    "*Estimated time for activity: 8 minutes. It is an individual activity.*\n",
     "\n",
     "The most popular repository at the moment is Zenodo. Review the following 4.5-minute video to get an overview of Zenodo and then sign up for an account. You can use your ORCID to sign up if you have one.\n",
     "\n",
@@ -1141,7 +1141,7 @@
     "\n",
     "#### <span style = \"color:green\">Activity 3:</span> Run a Jupyter Notebook Yourself from the Browser\n",
     "\n",
-    "*Estimated time for activity: 15 minutes*\n",
+    "*Estimated time for activity: 15 minutes. It is an individual activity.*\n",
     "\n",
     "Let's use an example from Project Pythia to showcase how computational notebooks can be used in science. Project Pythia is an education Hub for the geoscientific community. They have some great learning resources and example research notebooks that are developed and maintained by the community and are freely available.\n",
     "\n",
@@ -1344,7 +1344,7 @@
     "\n",
     "#### <span style = \"color: green\">Activity 4:</span> Identify an Open-Access Journal\n",
     "\n",
-    "*Estimated time for activity: 7 minutes*\n",
+    "*Estimated time for activity: 7 minutes. It is an individual activity.*\n",
     "\n",
     "To become more familiar with the [DOAJ](https://doaj.org/), visit [https://doaj.org/](https://doaj.org/) and search for *Frontiers in Computational Neuroscience* published by the American Astronomical Society. Once you select the journal, you can see costs to publish, details about licensing, author retention rights, time to publication, and other details.\n",
     "\n",

diff --git a/tutorials/W1D3_OpenData/W1D3_Tutorial1.ipynb b/tutorials/W1D3_OpenData/W1D3_Tutorial1.ipynb
@@ -534,7 +534,7 @@
     "\n",
     "#### <span style = \"color:green\">Activity 1:</span> Discover Data\n",
     "\n",
-    "*Estimated time for activity: 10 minutes*\n",
+    "*Estimated time for activity: 10 minutes. It is an individual activity.*\n",
     "\n",
     "In this activity, visit the links left above to the websites and repositories where open data is located. Find a specific dataset that suits your current research / studies and the one that you might find interesting by itself - it might be your next scientific journey, which will start with this data! Please save the links to the datasets, as you will need to revisit them later in the next activity."
    ]
@@ -789,7 +789,7 @@
    "source": [
     "#### <span style = \"color:green\">Activity 2:</span> Following License\n",
     "\n",
-    "*Estimated time for activity: 5 minutes*\n",
+    "*Estimated time for activity: 5 minutes. It is an individual activity.*\n",
     "\n",
     "Take a look at the saved datasets from the previous activity and the license for this data. What can you do with the data - are you allowed to use it freely in your research? Can you start your own startup which is based on the model built from this data?"
    ]
@@ -1126,7 +1126,7 @@
     "\n",
     "### <span style = \"color:green\">Activity 3:</span> Review a data management plan\n",
     "\n",
-    "*Estimated time for activity: 15 minutes*\n",
+    "*Estimated time for activity: 15 minutes. It is a group activity.*\n",
     "\n",
     "Take a look at the examples of a public data management plan from [University of North Carolina at Chapel Hill](https://dmptool.org/plans/113336/export.pdf?export%5Bpub%5D=true&export%5Bquestion_headings%5D=true) and from [University of California San Diego](https://library.ucsd.edu/research-and-collections/research-data/_files/dmpsample/DMP-Example-Psych.doc).\n",
     "\n",

diff --git a/tutorials/W1D3_OpenData/instructor/W1D3_Tutorial1.ipynb b/tutorials/W1D3_OpenData/instructor/W1D3_Tutorial1.ipynb
@@ -534,7 +534,7 @@
     "\n",
     "#### <span style = \"color:green\">Activity 1:</span> Discover Data\n",
     "\n",
-    "*Estimated time for activity: 10 minutes*\n",
+    "*Estimated time for activity: 10 minutes. It is an individual activity.*\n",
     "\n",
     "In this activity, visit the links left above to the websites and repositories where open data is located. Find a specific dataset that suits your current research / studies and the one that you might find interesting by itself - it might be your next scientific journey, which will start with this data! Please save the links to the datasets, as you will need to revisit them later in the next activity."
    ]
@@ -789,7 +789,7 @@
    "source": [
     "#### <span style = \"color:green\">Activity 2:</span> Following License\n",
     "\n",
-    "*Estimated time for activity: 5 minutes*\n",
+    "*Estimated time for activity: 5 minutes. It is an individual activity.*\n",
     "\n",
     "Take a look at the saved datasets from the previous activity and the license for this data. What can you do with the data - are you allowed to use it freely in your research? Can you start your own startup which is based on the model built from this data?"
    ]
@@ -1126,7 +1126,7 @@
     "\n",
     "### <span style = \"color:green\">Activity 3:</span> Review a data management plan\n",
     "\n",
-    "*Estimated time for activity: 15 minutes*\n",
+    "*Estimated time for activity: 15 minutes. It is a group activity.*\n",
     "\n",
     "Take a look at the examples of a public data management plan from [University of North Carolina at Chapel Hill](https://dmptool.org/plans/113336/export.pdf?export%5Bpub%5D=true&export%5Bquestion_headings%5D=true) and from [University of California San Diego](https://library.ucsd.edu/research-and-collections/research-data/_files/dmpsample/DMP-Example-Psych.doc).\n",
     "\n",

diff --git a/tutorials/W1D3_OpenData/student/W1D3_Tutorial1.ipynb b/tutorials/W1D3_OpenData/student/W1D3_Tutorial1.ipynb
@@ -534,7 +534,7 @@
     "\n",
     "#### <span style = \"color:green\">Activity 1:</span> Discover Data\n",
     "\n",
-    "*Estimated time for activity: 10 minutes*\n",
+    "*Estimated time for activity: 10 minutes. It is an individual activity.*\n",
     "\n",
     "In this activity, visit the links left above to the websites and repositories where open data is located. Find a specific dataset that suits your current research / studies and the one that you might find interesting by itself - it might be your next scientific journey, which will start with this data! Please save the links to the datasets, as you will need to revisit them later in the next activity."
    ]
@@ -789,7 +789,7 @@
    "source": [
     "#### <span style = \"color:green\">Activity 2:</span> Following License\n",
     "\n",
-    "*Estimated time for activity: 5 minutes*\n",
+    "*Estimated time for activity: 5 minutes. It is an individual activity.*\n",
     "\n",
     "Take a look at the saved datasets from the previous activity and the license for this data. What can you do with the data - are you allowed to use it freely in your research? Can you start your own startup which is based on the model built from this data?"
    ]
@@ -1126,7 +1126,7 @@
     "\n",
     "### <span style = \"color:green\">Activity 3:</span> Review a data management plan\n",
     "\n",
-    "*Estimated time for activity: 15 minutes*\n",
+    "*Estimated time for activity: 15 minutes. It is a group activity.*\n",
     "\n",
     "Take a look at the examples of a public data management plan from [University of North Carolina at Chapel Hill](https://dmptool.org/plans/113336/export.pdf?export%5Bpub%5D=true&export%5Bquestion_headings%5D=true) and from [University of California San Diego](https://library.ucsd.edu/research-and-collections/research-data/_files/dmpsample/DMP-Example-Psych.doc).\n",
     "\n",

diff --git a/tutorials/W1D4_OpenCode/W1D4_Tutorial1.ipynb b/tutorials/W1D4_OpenCode/W1D4_Tutorial1.ipynb
@@ -482,7 +482,7 @@
    "source": [
     "#### <span style = \"color: green\">Activity 1:</span> Find Code For Your Research\n",
     "\n",
-    "*Estimated time for activity: 7 minutes*\n",
+    "*Estimated time for activity: 7 minutes. It is an individual activity.*\n",
     "\n",
     "In this activity, you are invited to find open-source code resources that might be beneficial for your current research and/or studies! You can start your searches with something general, such as \"spike sorting\", and then end with more specific to your particular area; who knows, you might find a lab that practices similar research techniques as your own! "
    ]
@@ -1258,7 +1258,7 @@
     "\n",
     "#### <span style = \"color: green\">Activity 2:</span> Create a DOI for a Test Code File\n",
     "\n",
-    "*Estimated time for activity: 15 minutes*\n",
+    "*Estimated time for activity: 10 minutes. It is an individual activity.*\n",
     "\n",
     "You can create Digital Object Identifiers (DOIs) for your code that makes it citable. You do this by archiving a GitHub code repository at Zenodo and issuing a DOI for the record.\n",
     "\n",
@@ -1274,7 +1274,7 @@
     "6.  Select any license.\n",
     "7.  Click 'Create repository'.\n",
     "8.  You will be automatically directed to your new repository webpage.\n",
-    "9.  Now, we will get a DOI from the Zenodo application. Note that we are going to use [https://sandbox.zenodo.org/](https://sandbox.zenodo.org/) to do this. This offers all the same capabilities as [https://zenodo.org](https://zenodo.org/) but is a testing site! Create a free account if you have not already.\n",
+    "9.  Now, we will get a DOI from the Zenodo application. Note that we are going to use [https://sandbox.zenodo.org/](https://sandbox.zenodo.org/) to do this. This offers all the same capabilities as [https://zenodo.org](https://zenodo.org/) but is a testing site! You need to sign up for this website even if you have already signed up for Zenodo - they have the separate database of users. **Please sign up with GitHub or with classic registration but not with your ORCID!**\n",
     "\n",
     "**Part 2: Create an archived repository and affiliated DOI.**\n",
     "\n",
@@ -1448,7 +1448,7 @@
    "source": [
     "### <span style = \"color: green\"> Activity 3:</span> Discussing an SMP\n",
     "\n",
-    "*Estimated time for activity: 8 minutes*\n",
+    "*Estimated time for activity: 12 minutes. It is a group activity.*\n",
     "\n",
     "In this activity, review the SMP below and think about these questions: \n",
     "\n",
@@ -1527,7 +1527,7 @@
     "\n",
     "#### <span style = \"color: green\">Activity 4:</span> Browse Through Some of the Communities of Practice\n",
     "\n",
-    "*Estimated time for activity: 7 minutes*\n",
+    "*Estimated time for activity: 6 minutes. It is an individual activity.*\n",
     "\n",
     "- Find and browse through the websites associated with two communities of practice listed in the previous section, \"Connect with Communities,\" or explore more of the options if the proposed ones are not of particular interest to you.\n",
     "  \n",