pathogen-repo-ci: Use status functions in conditionals instead of continue-on-error: true #99
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While "continue-on-error: true" resulted in the behaviour we wanted, it also meant the job step status indicators were misleading: even when an ingest/phylogenetic/nextclade step failed, the UI showed a check mark for them in the logs. Instead of masking failures to keep going in the face of errors, override the default success() conditional by specifying our own conditions on a status expression.
Related-to: #98 (comment)
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