Merge pull request #17 from nmfs-opensci/may8

big clean

_quarto.yml

@@ -5,7 +5,7 @@ project:
     - "*.*"
     - "!tutorials/python-notebooks/*.ipynb"
     - "!tutorials/r/gdalcubes.qmd"
-    - "!tutorials/r/05-r-geospatial.qmd"
+    - "!tutorials/r/5-r-geospatial.qmd"
 
 execute:
   freeze: auto
@@ -69,10 +69,10 @@ website:
                 href: tutorials/r/2-subset-and-plot.qmd
               - text: Mask and Aggregate
                 href: tutorials/r/3-extract-satellite-data-within-boundary.qmd
-              - text: Get Points
-                href: tutorials/r/4-matchup-satellite-data-to-track-locations.qmd
-              - text: "Bonus: Geospatial Data"
-                href: tutorials/r/5-r-geospatial.qmd
+#              - text: Get Points
+#                href: tutorials/r/4-matchup-satellite-data-to-track-locations.qmd
+#              - text: "Bonus: Geospatial Data"
+#                href: tutorials/r/5-r-geospatial.qmd
           - section: "Tutorials in Python"
             contents:
               - text: Search
@@ -81,8 +81,8 @@ website:
                 href: tutorials/python/2-subset-and-plot.ipynb
               - text: Mask and Aggregate
                 href: tutorials/python/3-extract-satellite-data-within-boundary.ipynb
-              - text: Get Points
-                href: tutorials/python/4-matchup-satellite-data-to-track-locations.ipynb
+#              - text: Get Points
+#                href: tutorials/python/4-matchup-satellite-data-to-track-locations.ipynb
       - text: <img width=100px>
       - text: <img src="/images/noaa_emblem_logo-2022.png" width=100px>
         href: https://fisheries.noaa.gov

docs/coc.html

@@ -159,7 +159,7 @@
           <li class="sidebar-item">
   <div class="sidebar-item-container"> 
   <a href="./setup.html" class="sidebar-item-text sidebar-link">
- <span class="menu-text">Set-up</span></a>
+ <span class="menu-text">Set-up - To work on JupyterHub</span></a>
   </div>
 </li>
           <li class="sidebar-item sidebar-item-section">
@@ -185,8 +185,20 @@
 </li>
           <li class="sidebar-item">
   <div class="sidebar-item-container"> 
-  <a href="./content/02-local-setup.html" class="sidebar-item-text sidebar-link">
- <span class="menu-text">Local set-up</span></a>
+  <a href="./content/02-local-setup-r.html" class="sidebar-item-text sidebar-link">
+ <span class="menu-text">Local set-up - R</span></a>
+  </div>
+</li>
+          <li class="sidebar-item">
+  <div class="sidebar-item-container"> 
+  <a href="./content/02-local-setup-python.html" class="sidebar-item-text sidebar-link">
+ <span class="menu-text">Local set-up - Python</span></a>
+  </div>
+</li>
+          <li class="sidebar-item">
+  <div class="sidebar-item-container"> 
+  <a href="./content/02-git.html" class="sidebar-item-text sidebar-link">
+ <span class="menu-text">Git-Authentication</span></a>
   </div>
 </li>
           <li class="sidebar-item">
@@ -275,12 +287,6 @@
   <a href="./tutorials/r/3-extract-satellite-data-within-boundary.html" class="sidebar-item-text sidebar-link">
  <span class="menu-text">Mask and Aggregate</span></a>
   </div>
-</li>
-          <li class="sidebar-item">
-  <div class="sidebar-item-container"> 
-  <a href="./tutorials/r/4-matchup-satellite-data-to-track-locations.html" class="sidebar-item-text sidebar-link">
- <span class="menu-text">Get Points</span></a>
-  </div>
 </li>
       </ul>
   </li>
@@ -310,12 +316,6 @@
   <a href="./tutorials/python/3-extract-satellite-data-within-boundary.html" class="sidebar-item-text sidebar-link">
  <span class="menu-text">Mask and Aggregate</span></a>
   </div>
-</li>
-          <li class="sidebar-item">
-  <div class="sidebar-item-container"> 
-  <a href="./tutorials/python/4-matchup-satellite-data-to-track-locations.html" class="sidebar-item-text sidebar-link">
- <span class="menu-text">Get Points</span></a>
-  </div>
 </li>
       </ul>
   </li>

docs/content/01-intro-to-cloud.html

@@ -159,7 +159,7 @@
           <li class="sidebar-item">
   <div class="sidebar-item-container"> 
   <a href="../setup.html" class="sidebar-item-text sidebar-link">
- <span class="menu-text">Set-up</span></a>
+ <span class="menu-text">Set-up - To work on JupyterHub</span></a>
   </div>
 </li>
           <li class="sidebar-item sidebar-item-section">
@@ -185,8 +185,20 @@
 </li>
           <li class="sidebar-item">
   <div class="sidebar-item-container"> 
-  <a href="../content/02-local-setup.html" class="sidebar-item-text sidebar-link">
- <span class="menu-text">Local set-up</span></a>
+  <a href="../content/02-local-setup-r.html" class="sidebar-item-text sidebar-link">
+ <span class="menu-text">Local set-up - R</span></a>
+  </div>
+</li>
+          <li class="sidebar-item">
+  <div class="sidebar-item-container"> 
+  <a href="../content/02-local-setup-python.html" class="sidebar-item-text sidebar-link">
+ <span class="menu-text">Local set-up - Python</span></a>
+  </div>
+</li>
+          <li class="sidebar-item">
+  <div class="sidebar-item-container"> 
+  <a href="../content/02-git.html" class="sidebar-item-text sidebar-link">
+ <span class="menu-text">Git-Authentication</span></a>
   </div>
 </li>
           <li class="sidebar-item">
@@ -275,12 +287,6 @@
   <a href="../tutorials/r/3-extract-satellite-data-within-boundary.html" class="sidebar-item-text sidebar-link">
  <span class="menu-text">Mask and Aggregate</span></a>
   </div>
-</li>
-          <li class="sidebar-item">
-  <div class="sidebar-item-container"> 
-  <a href="../tutorials/r/4-matchup-satellite-data-to-track-locations.html" class="sidebar-item-text sidebar-link">
- <span class="menu-text">Get Points</span></a>
-  </div>
 </li>
       </ul>
   </li>
@@ -310,12 +316,6 @@
   <a href="../tutorials/python/3-extract-satellite-data-within-boundary.html" class="sidebar-item-text sidebar-link">
  <span class="menu-text">Mask and Aggregate</span></a>
   </div>
-</li>
-          <li class="sidebar-item">
-  <div class="sidebar-item-container"> 
-  <a href="../tutorials/python/4-matchup-satellite-data-to-track-locations.html" class="sidebar-item-text sidebar-link">
- <span class="menu-text">Get Points</span></a>
-  </div>
 </li>
       </ul>
   </li>

docs/content/01-intro-to-jupyterhub.html

@@ -159,7 +159,7 @@
           <li class="sidebar-item">
   <div class="sidebar-item-container"> 
   <a href="../setup.html" class="sidebar-item-text sidebar-link">
- <span class="menu-text">Set-up</span></a>
+ <span class="menu-text">Set-up - To work on JupyterHub</span></a>
   </div>
 </li>
           <li class="sidebar-item sidebar-item-section">
@@ -185,8 +185,20 @@
 </li>
           <li class="sidebar-item">
   <div class="sidebar-item-container"> 
-  <a href="../content/02-local-setup.html" class="sidebar-item-text sidebar-link">
- <span class="menu-text">Local set-up</span></a>
+  <a href="../content/02-local-setup-r.html" class="sidebar-item-text sidebar-link">
+ <span class="menu-text">Local set-up - R</span></a>
+  </div>
+</li>
+          <li class="sidebar-item">
+  <div class="sidebar-item-container"> 
+  <a href="../content/02-local-setup-python.html" class="sidebar-item-text sidebar-link">
+ <span class="menu-text">Local set-up - Python</span></a>
+  </div>
+</li>
+          <li class="sidebar-item">
+  <div class="sidebar-item-container"> 
+  <a href="../content/02-git.html" class="sidebar-item-text sidebar-link">
+ <span class="menu-text">Git-Authentication</span></a>
   </div>
 </li>
           <li class="sidebar-item">
@@ -275,12 +287,6 @@
   <a href="../tutorials/r/3-extract-satellite-data-within-boundary.html" class="sidebar-item-text sidebar-link">
  <span class="menu-text">Mask and Aggregate</span></a>
   </div>
-</li>
-          <li class="sidebar-item">
-  <div class="sidebar-item-container"> 
-  <a href="../tutorials/r/4-matchup-satellite-data-to-track-locations.html" class="sidebar-item-text sidebar-link">
- <span class="menu-text">Get Points</span></a>
-  </div>
 </li>
       </ul>
   </li>
@@ -310,12 +316,6 @@
   <a href="../tutorials/python/3-extract-satellite-data-within-boundary.html" class="sidebar-item-text sidebar-link">
  <span class="menu-text">Mask and Aggregate</span></a>
   </div>
-</li>
-          <li class="sidebar-item">
-  <div class="sidebar-item-container"> 
-  <a href="../tutorials/python/4-matchup-satellite-data-to-track-locations.html" class="sidebar-item-text sidebar-link">
- <span class="menu-text">Get Points</span></a>
-  </div>
 </li>
       </ul>
   </li>

docs/content/01-welcome.html

@@ -159,7 +159,7 @@
           <li class="sidebar-item">
   <div class="sidebar-item-container"> 
   <a href="../setup.html" class="sidebar-item-text sidebar-link">
- <span class="menu-text">Set-up</span></a>
+ <span class="menu-text">Set-up - To work on JupyterHub</span></a>
   </div>
 </li>
           <li class="sidebar-item sidebar-item-section">
@@ -185,8 +185,20 @@
 </li>
           <li class="sidebar-item">
   <div class="sidebar-item-container"> 
-  <a href="../content/02-local-setup.html" class="sidebar-item-text sidebar-link">
- <span class="menu-text">Local set-up</span></a>
+  <a href="../content/02-local-setup-r.html" class="sidebar-item-text sidebar-link">
+ <span class="menu-text">Local set-up - R</span></a>
+  </div>
+</li>
+          <li class="sidebar-item">
+  <div class="sidebar-item-container"> 
+  <a href="../content/02-local-setup-python.html" class="sidebar-item-text sidebar-link">
+ <span class="menu-text">Local set-up - Python</span></a>
+  </div>
+</li>
+          <li class="sidebar-item">
+  <div class="sidebar-item-container"> 
+  <a href="../content/02-git.html" class="sidebar-item-text sidebar-link">
+ <span class="menu-text">Git-Authentication</span></a>
   </div>
 </li>
           <li class="sidebar-item">
@@ -275,12 +287,6 @@
   <a href="../tutorials/r/3-extract-satellite-data-within-boundary.html" class="sidebar-item-text sidebar-link">
  <span class="menu-text">Mask and Aggregate</span></a>
   </div>
-</li>
-          <li class="sidebar-item">
-  <div class="sidebar-item-container"> 
-  <a href="../tutorials/r/4-matchup-satellite-data-to-track-locations.html" class="sidebar-item-text sidebar-link">
- <span class="menu-text">Get Points</span></a>
-  </div>
 </li>
       </ul>
   </li>
@@ -310,12 +316,6 @@
   <a href="../tutorials/python/3-extract-satellite-data-within-boundary.html" class="sidebar-item-text sidebar-link">
  <span class="menu-text">Mask and Aggregate</span></a>
   </div>
-</li>
-          <li class="sidebar-item">
-  <div class="sidebar-item-container"> 
-  <a href="../tutorials/python/4-matchup-satellite-data-to-track-locations.html" class="sidebar-item-text sidebar-link">
- <span class="menu-text">Get Points</span></a>
-  </div>
 </li>
       </ul>
   </li>

docs/content/02-earthdata.html

@@ -29,7 +29,7 @@
 <script src="../site_libs/quarto-search/fuse.min.js"></script>
 <script src="../site_libs/quarto-search/quarto-search.js"></script>
 <meta name="quarto:offset" content="../">
-<link href="../content/02-local-setup.html" rel="next">
+<link href="../content/02-local-setup-r.html" rel="next">
 <link href="../content/02-rstudio.html" rel="prev">
 <link href="../images/favicon-16x16.png" rel="icon" type="image/png">
 <script src="../site_libs/quarto-html/quarto.js"></script>
@@ -159,7 +159,7 @@
           <li class="sidebar-item">
   <div class="sidebar-item-container"> 
   <a href="../setup.html" class="sidebar-item-text sidebar-link">
- <span class="menu-text">Set-up</span></a>
+ <span class="menu-text">Set-up - To work on JupyterHub</span></a>
   </div>
 </li>
           <li class="sidebar-item sidebar-item-section">
@@ -185,8 +185,20 @@
 </li>
           <li class="sidebar-item">
   <div class="sidebar-item-container"> 
-  <a href="../content/02-local-setup.html" class="sidebar-item-text sidebar-link">
- <span class="menu-text">Local set-up</span></a>
+  <a href="../content/02-local-setup-r.html" class="sidebar-item-text sidebar-link">
+ <span class="menu-text">Local set-up - R</span></a>
+  </div>
+</li>
+          <li class="sidebar-item">
+  <div class="sidebar-item-container"> 
+  <a href="../content/02-local-setup-python.html" class="sidebar-item-text sidebar-link">
+ <span class="menu-text">Local set-up - Python</span></a>
+  </div>
+</li>
+          <li class="sidebar-item">
+  <div class="sidebar-item-container"> 
+  <a href="../content/02-git.html" class="sidebar-item-text sidebar-link">
+ <span class="menu-text">Git-Authentication</span></a>
   </div>
 </li>
           <li class="sidebar-item">
@@ -275,12 +287,6 @@
   <a href="../tutorials/r/3-extract-satellite-data-within-boundary.html" class="sidebar-item-text sidebar-link">
  <span class="menu-text">Mask and Aggregate</span></a>
   </div>
-</li>
-          <li class="sidebar-item">
-  <div class="sidebar-item-container"> 
-  <a href="../tutorials/r/4-matchup-satellite-data-to-track-locations.html" class="sidebar-item-text sidebar-link">
- <span class="menu-text">Get Points</span></a>
-  </div>
 </li>
       </ul>
   </li>
@@ -310,12 +316,6 @@
   <a href="../tutorials/python/3-extract-satellite-data-within-boundary.html" class="sidebar-item-text sidebar-link">
  <span class="menu-text">Mask and Aggregate</span></a>
   </div>
-</li>
-          <li class="sidebar-item">
-  <div class="sidebar-item-container"> 
-  <a href="../tutorials/python/4-matchup-satellite-data-to-track-locations.html" class="sidebar-item-text sidebar-link">
- <span class="menu-text">Get Points</span></a>
-  </div>
 </li>
       </ul>
   </li>
@@ -949,8 +949,8 @@ <h2 class="anchored" data-anchor-id="configure-programmatic-access-to-nasa-serve
       </a>          
   </div>
   <div class="nav-page nav-page-next">
-      <a href="../content/02-local-setup.html" class="pagination-link" aria-label="Local set-up">
-        <span class="nav-page-text">Local set-up</span> <i class="bi bi-arrow-right-short"></i>
+      <a href="../content/02-local-setup-r.html" class="pagination-link" aria-label="Local set-up - R">
+        <span class="nav-page-text">Local set-up - R</span> <i class="bi bi-arrow-right-short"></i>
       </a>
   </div>
 </nav>