Incremented version number to 1.2.2

numericalalgorithmsgroup · Feb 26, 2021 · 66ed896 · 66ed896
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diff --git a/dfols/version.py b/dfols/version.py
@@ -22,4 +22,4 @@
 
 """
 
-__version__ = '1.2.1'
+__version__ = '1.2.2'
diff --git a/docs/build/doctrees/environment.pickle b/docs/build/doctrees/environment.pickle
diff --git a/docs/build/doctrees/history.doctree b/docs/build/doctrees/history.doctree
diff --git a/docs/build/doctrees/index.doctree b/docs/build/doctrees/index.doctree
diff --git a/docs/build/html/.buildinfo b/docs/build/html/.buildinfo
@@ -1,4 +1,4 @@
 # Sphinx build info version 1
 # This file hashes the configuration used when building these files. When it is not found, a full rebuild will be done.
-config: 7b9055b46ddcac05cf7b8a779833843b
+config: b3ad0b00e790bb6579f3b5d48d034bbf
 tags: 645f666f9bcd5a90fca523b33c5a78b7
diff --git a/docs/build/html/_sources/history.rst.txt b/docs/build/html/_sources/history.rst.txt
@@ -38,3 +38,6 @@ Version 1.2.1 (13 Feb 2020)
 ---------------------------
 * Make the use of the `trustregion <https://github.com/lindonroberts/trust-region>`_ package optional, not installed by default.
 
+Version 1.2.2 (26 Feb 2021)
+---------------------------
+* Minor update to remove NumPy deprecation warnings - no changes to the DFO-LS algorithm.
diff --git a/docs/build/html/_static/documentation_options.js b/docs/build/html/_static/documentation_options.js
@@ -1,6 +1,6 @@
 var DOCUMENTATION_OPTIONS = {
     URL_ROOT: document.getElementById("documentation_options").getAttribute('data-url_root'),
-    VERSION: '1.2.1',
+    VERSION: '1.2.2',
     LANGUAGE: 'None',
     COLLAPSE_INDEX: false,
     BUILDER: 'html',

diff --git a/docs/build/html/advanced.html b/docs/build/html/advanced.html
@@ -8,7 +8,7 @@
 
   <meta name="viewport" content="width=device-width, initial-scale=1.0">
 
-  <title>Advanced Usage &mdash; DFO-LS v1.2.1 documentation</title>
+  <title>Advanced Usage &mdash; DFO-LS v1.2.2 documentation</title>
 
 
 
@@ -61,7 +61,7 @@
 
 
               <div class="version">
-                1.2.1
+                1.2.2
               </div>
 
 

diff --git a/docs/build/html/diagnostic.html b/docs/build/html/diagnostic.html
@@ -8,7 +8,7 @@
 
   <meta name="viewport" content="width=device-width, initial-scale=1.0">
 
-  <title>Diagnostic Information &mdash; DFO-LS v1.2.1 documentation</title>
+  <title>Diagnostic Information &mdash; DFO-LS v1.2.2 documentation</title>
 
 
 
@@ -61,7 +61,7 @@
 
 
               <div class="version">
-                1.2.1
+                1.2.2
               </div>
 
 

diff --git a/docs/build/html/genindex.html b/docs/build/html/genindex.html
@@ -9,7 +9,7 @@
 
   <meta name="viewport" content="width=device-width, initial-scale=1.0">
 
-  <title>Index &mdash; DFO-LS v1.2.1 documentation</title>
+  <title>Index &mdash; DFO-LS v1.2.2 documentation</title>
 
 
 
@@ -60,7 +60,7 @@
 
 
               <div class="version">
-                1.2.1
+                1.2.2
               </div>
 
 

diff --git a/docs/build/html/history.html b/docs/build/html/history.html
@@ -8,7 +8,7 @@
 
   <meta name="viewport" content="width=device-width, initial-scale=1.0">
 
-  <title>Version History &mdash; DFO-LS v1.2.1 documentation</title>
+  <title>Version History &mdash; DFO-LS v1.2.2 documentation</title>
 
 
 
@@ -60,7 +60,7 @@
 
 
               <div class="version">
-                1.2.1
+                1.2.2
               </div>
 
 
@@ -99,6 +99,7 @@
 <li class="toctree-l2"><a class="reference internal" href="#version-1-1-1-5-apr-2019">Version 1.1.1 (5 Apr 2019)</a></li>
 <li class="toctree-l2"><a class="reference internal" href="#version-1-2-12-feb-2020">Version 1.2 (12 Feb 2020)</a></li>
 <li class="toctree-l2"><a class="reference internal" href="#version-1-2-1-13-feb-2020">Version 1.2.1 (13 Feb 2020)</a></li>
+<li class="toctree-l2"><a class="reference internal" href="#version-1-2-2-26-feb-2021">Version 1.2.2 (26 Feb 2021)</a></li>
 </ul>
 </li>
 </ul>
@@ -218,6 +219,12 @@ <h2>Version 1.2.1 (13 Feb 2020)<a class="headerlink" href="#version-1-2-1-13-feb
 <li><p>Make the use of the <a class="reference external" href="https://github.com/lindonroberts/trust-region">trustregion</a> package optional, not installed by default.</p></li>
 </ul>
 </div>
+<div class="section" id="version-1-2-2-26-feb-2021">
+<h2>Version 1.2.2 (26 Feb 2021)<a class="headerlink" href="#version-1-2-2-26-feb-2021" title="Permalink to this headline">¶</a></h2>
+<ul class="simple">
+<li><p>Minor update to remove NumPy deprecation warnings - no changes to the DFO-LS algorithm.</p></li>
+</ul>
+</div>
 </div>
 
 

diff --git a/docs/build/html/index.html b/docs/build/html/index.html
@@ -8,7 +8,7 @@
 
   <meta name="viewport" content="width=device-width, initial-scale=1.0">
 
-  <title>DFO-LS: Derivative-Free Optimizer for Least-Squares Minimization &mdash; DFO-LS v1.2.1 documentation</title>
+  <title>DFO-LS: Derivative-Free Optimizer for Least-Squares Minimization &mdash; DFO-LS v1.2.2 documentation</title>
 
 
 
@@ -60,7 +60,7 @@
 
 
               <div class="version">
-                1.2.1
+                1.2.2
               </div>
 
 
@@ -158,8 +158,8 @@
 
   <div class="section" id="dfo-ls-derivative-free-optimizer-for-least-squares-minimization">
 <h1>DFO-LS: Derivative-Free Optimizer for Least-Squares Minimization<a class="headerlink" href="#dfo-ls-derivative-free-optimizer-for-least-squares-minimization" title="Permalink to this headline">¶</a></h1>
-<p><strong>Release:</strong> 1.2.1</p>
-<p><strong>Date:</strong> 25 February 2021</p>
+<p><strong>Release:</strong> 1.2.2</p>
+<p><strong>Date:</strong> 26 February 2021</p>
 <p><strong>Author:</strong> <a class="reference external" href="mailto:lindon&#46;roberts&#37;&#52;&#48;anu&#46;edu&#46;au">Lindon Roberts</a></p>
 <p>DFO-LS is a flexible package for finding local solutions to nonlinear least-squares minimization problems (with optional bound constraints), without requiring any derivatives of the objective. DFO-LS stands for Derivative-Free Optimizer for Least-Squares.</p>
 <p>That is, DFO-LS solves</p>
@@ -232,6 +232,7 @@ <h1>DFO-LS: Derivative-Free Optimizer for Least-Squares Minimization<a class="he
 <li class="toctree-l2"><a class="reference internal" href="history.html#version-1-1-1-5-apr-2019">Version 1.1.1 (5 Apr 2019)</a></li>
 <li class="toctree-l2"><a class="reference internal" href="history.html#version-1-2-12-feb-2020">Version 1.2 (12 Feb 2020)</a></li>
 <li class="toctree-l2"><a class="reference internal" href="history.html#version-1-2-1-13-feb-2020">Version 1.2.1 (13 Feb 2020)</a></li>
+<li class="toctree-l2"><a class="reference internal" href="history.html#version-1-2-2-26-feb-2021">Version 1.2.2 (26 Feb 2021)</a></li>
 </ul>
 </li>
 </ul>

diff --git a/docs/build/html/info.html b/docs/build/html/info.html
@@ -8,7 +8,7 @@
 
   <meta name="viewport" content="width=device-width, initial-scale=1.0">
 
-  <title>Overview &mdash; DFO-LS v1.2.1 documentation</title>
+  <title>Overview &mdash; DFO-LS v1.2.2 documentation</title>
 
 
 
@@ -61,7 +61,7 @@
 
 
               <div class="version">
-                1.2.1
+                1.2.2
               </div>
 
 

diff --git a/docs/build/html/install.html b/docs/build/html/install.html
@@ -8,7 +8,7 @@
 
   <meta name="viewport" content="width=device-width, initial-scale=1.0">
 
-  <title>Installing DFO-LS &mdash; DFO-LS v1.2.1 documentation</title>
+  <title>Installing DFO-LS &mdash; DFO-LS v1.2.2 documentation</title>
 
 
 
@@ -61,7 +61,7 @@
 
 
               <div class="version">
-                1.2.1
+                1.2.2
               </div>
 
 

diff --git a/docs/build/html/objects.inv b/docs/build/html/objects.inv
diff --git a/docs/build/html/search.html b/docs/build/html/search.html
@@ -8,7 +8,7 @@
 
   <meta name="viewport" content="width=device-width, initial-scale=1.0">
 
-  <title>Search &mdash; DFO-LS v1.2.1 documentation</title>
+  <title>Search &mdash; DFO-LS v1.2.2 documentation</title>
 
 
 
@@ -60,7 +60,7 @@
 
 
               <div class="version">
-                1.2.1
+                1.2.2
               </div>
 
 

diff --git a/docs/build/html/searchindex.js b/docs/build/html/searchindex.js
diff --git a/docs/build/html/userguide.html b/docs/build/html/userguide.html
@@ -8,7 +8,7 @@
 
   <meta name="viewport" content="width=device-width, initial-scale=1.0">
 
-  <title>Using DFO-LS &mdash; DFO-LS v1.2.1 documentation</title>
+  <title>Using DFO-LS &mdash; DFO-LS v1.2.2 documentation</title>
 
 
 
@@ -61,7 +61,7 @@
 
 
               <div class="version">
-                1.2.1
+                1.2.2
               </div>
 
 

diff --git a/docs/build/latex/DFOLS.aux b/docs/build/latex/DFOLS.aux
@@ -137,6 +137,8 @@
 \newlabel{history:version-1-2-12-feb-2020}{{6.6}{28}{Version 1.2 (12 Feb 2020)}{section.6.6}{}}
 \@writefile{toc}{\contentsline {section}{\numberline {6.7}Version 1.2.1 (13 Feb 2020)}{28}{section.6.7}}
 \newlabel{history:version-1-2-1-13-feb-2020}{{6.7}{28}{Version 1.2.1 (13 Feb 2020)}{section.6.7}{}}
+\@writefile{toc}{\contentsline {section}{\numberline {6.8}Version 1.2.2 (26 Feb 2021)}{28}{section.6.8}}
+\newlabel{history:version-1-2-2-26-feb-2021}{{6.8}{28}{Version 1.2.2 (26 Feb 2021)}{section.6.8}{}}
 \@writefile{toc}{\contentsline {chapter}{\numberline {7}Acknowledgements}{29}{chapter.7}}
 \@writefile{lof}{\addvspace {10\p@ }}
 \@writefile{lot}{\addvspace {10\p@ }}

diff --git a/docs/build/latex/DFOLS.fdb_latexmk b/docs/build/latex/DFOLS.fdb_latexmk
@@ -1,10 +1,10 @@
 # Fdb version 3
-["makeindex DFOLS.idx"] 1533896586 "DFOLS.idx" "DFOLS.ind" "DFOLS" 1614221636
-  "DFOLS.idx" 1614221635 0 d41d8cd98f00b204e9800998ecf8427e ""
+["makeindex DFOLS.idx"] 1533896586 "DFOLS.idx" "DFOLS.ind" "DFOLS" 1614300747
+  "DFOLS.idx" 1614300747 0 d41d8cd98f00b204e9800998ecf8427e ""
   (generated)
-  "DFOLS.ind"
   "DFOLS.ilg"
-["pdflatex"] 1614221635 "DFOLS.tex" "DFOLS.pdf" "DFOLS" 1614221636
+  "DFOLS.ind"
+["pdflatex"] 1614300746 "DFOLS.tex" "DFOLS.pdf" "DFOLS" 1614300747
   "/etc/texmf/web2c/texmf.cnf" 1585531380 475 c0e671620eb5563b2130f56340a5fde8 ""
   "/usr/share/texlive/texmf-dist/fonts/enc/dvips/base/8r.enc" 1480098666 4850 80dc9bab7f31fb78a000ccfed0e27cab ""
   "/usr/share/texlive/texmf-dist/fonts/map/fontname/texfonts.map" 1511824771 3332 103109f5612ad95229751940c61aada0 ""
@@ -166,22 +166,22 @@
   "/usr/share/texmf/web2c/texmf.cnf" 1520210507 32485 c64754543d8ac501bea6e75e209ea521 ""
   "/var/lib/texmf/fonts/map/pdftex/updmap/pdftex.map" 1586757552 2556815 161db45eb32a3ed5e427095833ec947f ""
   "/var/lib/texmf/web2c/pdftex/pdflatex.fmt" 1585531429 724918 9f2ac0f6dd6683249c7737077a8c4a4a ""
-  "DFOLS.aux" 1614221635 11651 0119d83321351f006e84d5de1ccebd99 ""
+  "DFOLS.aux" 1614300747 11856 547c48b611f2050900d4f74799a1f448 ""
   "DFOLS.ind" 1587347499 0 d41d8cd98f00b204e9800998ecf8427e "makeindex DFOLS.idx"
-  "DFOLS.out" 1614221635 8602 f85158c16c05d03733e31155b8a0eed4 ""
-  "DFOLS.tex" 1614221633 83486 7caa0997ef8200e3bf8a1d8e9cbe44c7 ""
-  "DFOLS.toc" 1614221635 4227 fec1afe1c2c2dba49d9acd12dab90c41 ""
+  "DFOLS.out" 1614300747 8810 f5382f59327f11b4e2db1922e220989a ""
+  "DFOLS.tex" 1614300744 83737 6e0f3d92bf0fb966f1fb51d1e49d6cc0 ""
+  "DFOLS.toc" 1614300747 4314 9d41c9e79cb3f1f5e9e87568180d6a10 ""
   "data_fitting.png" 1587347499 29893 211bb1c28ea25d47c8c0990fbf39c55c ""
   "footnotehyper-sphinx.sty" 1587347499 8888 1bbd7bdeae8c8bed1d10d551bddb1cc9 ""
   "sphinx.sty" 1614221565 82020 a38700b8aa22dfd94a8a5b905e69be73 ""
-  "sphinxhighlight.sty" 1614221634 6607 9139c967ef186821cb11bb3b0580e00e ""
+  "sphinxhighlight.sty" 1614300745 6607 9139c967ef186821cb11bb3b0580e00e ""
   "sphinxmanual.cls" 1587347499 4236 124cd90deb92742b5d3922bfc2cd70c0 ""
-  "sphinxmessages.sty" 1614221634 745 3f5fcd6cdd7964ed608767954a8ced6f ""
+  "sphinxmessages.sty" 1614300745 745 3f5fcd6cdd7964ed608767954a8ced6f ""
   "sphinxmulticell.sty" 1587347499 14606 0b6edc2b1a83546ed92026d1f6a311b5 ""
   (generated)
-  "DFOLS.toc"
   "DFOLS.out"
+  "DFOLS.aux"
   "DFOLS.idx"
   "DFOLS.pdf"
-  "DFOLS.aux"
   "DFOLS.log"
+  "DFOLS.toc"
diff --git a/docs/build/latex/DFOLS.log b/docs/build/latex/DFOLS.log
@@ -1,4 +1,4 @@
-This is pdfTeX, Version 3.14159265-2.6-1.40.18 (TeX Live 2017/Debian) (preloaded format=pdflatex 2020.3.30)  25 FEB 2021 13:53
+This is pdfTeX, Version 3.14159265-2.6-1.40.18 (TeX Live 2017/Debian) (preloaded format=pdflatex 2020.3.30)  26 FEB 2021 11:52
 entering extended mode
  restricted \write18 enabled.
  %&-line parsing enabled.
@@ -1195,7 +1195,7 @@ Overfull \vbox (2.68167pt too high) detected at line 716
  []
 
 [14] [15]
-<data_fitting.png, id=394, 524.6802pt x 403.2666pt>
+<data_fitting.png, id=399, 524.6802pt x 403.2666pt>
 File: data_fitting.png Graphic file (type png)
 <use data_fitting.png>
 Package pdftex.def Info: data_fitting.png  used on input line 816.
@@ -1243,24 +1243,24 @@ Chapter 7.
 ] [30
 
 ] (./DFOLS.ind)
-Package atveryend Info: Empty hook `BeforeClearDocument' on input line 1378.
+Package atveryend Info: Empty hook `BeforeClearDocument' on input line 1386.
  [31
 
 ]
-Package atveryend Info: Empty hook `AfterLastShipout' on input line 1378.
+Package atveryend Info: Empty hook `AfterLastShipout' on input line 1386.
  (./DFOLS.aux)
-Package atveryend Info: Executing hook `AtVeryEndDocument' on input line 1378.
-Package atveryend Info: Executing hook `AtEndAfterFileList' on input line 1378.
+Package atveryend Info: Executing hook `AtVeryEndDocument' on input line 1386.
+Package atveryend Info: Executing hook `AtEndAfterFileList' on input line 1386.
 
 Package rerunfilecheck Info: File `DFOLS.out' has not changed.
-(rerunfilecheck)             Checksum: F85158C16C05D03733E31155B8A0EED4;8602.
-Package atveryend Info: Empty hook `AtVeryVeryEnd' on input line 1378.
+(rerunfilecheck)             Checksum: F5382F59327F11B4E2DB1922E220989A;8810.
+Package atveryend Info: Empty hook `AtVeryVeryEnd' on input line 1386.
  ) 
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 mf-dist/fonts/type1/urw/times/utmri8a.pfb>
-Output written on DFOLS.pdf (35 pages, 300897 bytes).
+Output written on DFOLS.pdf (35 pages, 301050 bytes).
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- 90 named destinations out of 1000 (max. 500000)
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+ 579 PDF objects out of 1000 (max. 8388607)
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+ 442 words of extra memory for PDF output out of 10000 (max. 10000000)
 
diff --git a/docs/build/latex/DFOLS.out b/docs/build/latex/DFOLS.out
@@ -47,5 +47,6 @@
 \BOOKMARK [1][-]{section.6.5}{\376\377\000V\000e\000r\000s\000i\000o\000n\000\040\0001\000.\0001\000.\0001\000\040\000\050\0005\000\040\000A\000p\000r\000\040\0002\0000\0001\0009\000\051}{chapter.6}% 47
 \BOOKMARK [1][-]{section.6.6}{\376\377\000V\000e\000r\000s\000i\000o\000n\000\040\0001\000.\0002\000\040\000\050\0001\0002\000\040\000F\000e\000b\000\040\0002\0000\0002\0000\000\051}{chapter.6}% 48
 \BOOKMARK [1][-]{section.6.7}{\376\377\000V\000e\000r\000s\000i\000o\000n\000\040\0001\000.\0002\000.\0001\000\040\000\050\0001\0003\000\040\000F\000e\000b\000\040\0002\0000\0002\0000\000\051}{chapter.6}% 49
-\BOOKMARK [0][-]{chapter.7}{\376\377\000A\000c\000k\000n\000o\000w\000l\000e\000d\000g\000e\000m\000e\000n\000t\000s}{}% 50
-\BOOKMARK [0][-]{chapter*.3}{\376\377\000B\000i\000b\000l\000i\000o\000g\000r\000a\000p\000h\000y}{}% 51
+\BOOKMARK [1][-]{section.6.8}{\376\377\000V\000e\000r\000s\000i\000o\000n\000\040\0001\000.\0002\000.\0002\000\040\000\050\0002\0006\000\040\000F\000e\000b\000\040\0002\0000\0002\0001\000\051}{chapter.6}% 50
+\BOOKMARK [0][-]{chapter.7}{\376\377\000A\000c\000k\000n\000o\000w\000l\000e\000d\000g\000e\000m\000e\000n\000t\000s}{}% 51
+\BOOKMARK [0][-]{chapter*.3}{\376\377\000B\000i\000b\000l\000i\000o\000g\000r\000a\000p\000h\000y}{}% 52
diff --git a/docs/build/latex/DFOLS.pdf b/docs/build/latex/DFOLS.pdf
diff --git a/docs/build/latex/DFOLS.tex b/docs/build/latex/DFOLS.tex
@@ -73,8 +73,8 @@
 
 
 \title{DFO-LS Documentation}
-\date{25 February 2021}
-\release{1.2.1}
+\date{26 February 2021}
+\release{1.2.2}
 \author{Lindon Roberts}
 \newcommand{\sphinxlogo}{\vbox{}}
 \renewcommand{\releasename}{Release}
@@ -89,9 +89,9 @@
 \phantomsection\label{\detokenize{index::doc}}
 
 
-\sphinxstylestrong{Release:} 1.2.1
+\sphinxstylestrong{Release:} 1.2.2
 
-\sphinxstylestrong{Date:} 25 February 2021
+\sphinxstylestrong{Date:} 26 February 2021
 
 \sphinxstylestrong{Author:} \sphinxhref{mailto:lindon.roberts@anu.edu.au}{Lindon Roberts}
 
@@ -1358,6 +1358,14 @@ \section{Version 1.2.1 (13 Feb 2020)}
 \end{itemize}
 
 
+\section{Version 1.2.2 (26 Feb 2021)}
+\label{\detokenize{history:version-1-2-2-26-feb-2021}}\begin{itemize}
+\item {} 
+Minor update to remove NumPy deprecation warnings \sphinxhyphen{} no changes to the DFO\sphinxhyphen{}LS algorithm.
+
+\end{itemize}
+
+
 \chapter{Acknowledgements}
 \label{\detokenize{index:acknowledgements}}
 This software was developed under the supervision of \sphinxhref{https://www.maths.ox.ac.uk/people/coralia.cartis}{Coralia Cartis}, and was supported by the EPSRC Centre For Doctoral Training in \sphinxhref{https://www.maths.ox.ac.uk/study-here/postgraduate-study/industrially-focused-mathematical-modelling-epsrc-cdt}{Industrially Focused Mathematical Modelling} (EP/L015803/1) in collaboration with the \sphinxhref{http://www.nag.com/}{Numerical Algorithms Group}.
Original file line number	Diff line number	Diff line change
Expand Up		@@ -22,4 +22,4 @@

		"""

		__version__ = '1.2.1'
		__version__ = '1.2.2'
-Original file line number
+Diff line change
@@ Expand Up / @@ -8,7 +8,7 @@ @@
       <meta name="viewport" content="width=device-width, initial-scale=1.0">
-      <title>Advanced Usage &mdash; DFO-LS v1.2.1 documentation</title>
+      <title>Advanced Usage &mdash; DFO-LS v1.2.2 documentation</title>
@@ Expand Down Expand Up / @@ -61,7 +61,7 @@ @@
                   <div class="version">
-.2.1
+.2.2
                   </div>
@@ Expand Down @@