Skip to content
Change the repository type filter

All

    Repositories list

    • cfa_azure

      Public
      Python
      Apache License 2.0
      3922Updated Dec 30, 2024Dec 30, 2024
    • Java
      31808Updated Dec 30, 2024Dec 30, 2024
    • Landing / marketing site for the SimpleReport application
      JavaScript
      Creative Commons Zero v1.0 Universal
      81152Updated Dec 30, 2024Dec 30, 2024
    • Code to flag ICD-10-CM codes related to opioid involvement, substance use disorder, and mental health issues in structured hospital data
      Python
      3600Updated Dec 30, 2024Dec 30, 2024
    • phoenix

      Public
      🔥🐦🔥PHoeNIx: a platform agnostic pipeline for healthcare-associated and antimicrobial resistant pathogens
      Python
      Apache License 2.0
      1960102Updated Dec 30, 2024Dec 30, 2024
    • eMKF

      Public
      SAS
      Apache License 2.0
      2200Updated Dec 29, 2024Dec 29, 2024
    • ixa

      Public
      Rust
      Apache License 2.0
      113143Updated Dec 29, 2024Dec 29, 2024
    • Models and infrastructure for forecasting COVID-19 and Flu hospitalizations using wastewater data with PyRenew
      Python
      Apache License 2.0
      15466Updated Dec 29, 2024Dec 29, 2024
    • SimpleReport is a fast, free, and easy way for COVID-19 testing facilities to report results to public health departments.
      Java
      Creative Commons Zero v1.0 Universal
      545838322Updated Dec 29, 2024Dec 29, 2024
    • ReportStream is a public intermediary tool for delivery of data between different parts of the healthcare ecosystem.
      Kotlin
      Creative Commons Zero v1.0 Universal
      41741.2k146Updated Dec 29, 2024Dec 29, 2024
    • Wastewater-informed COVID-19 forecasting models submitted to the COVID-19 Forecast Hub
      R
      Apache License 2.0
      1046834Updated Dec 28, 2024Dec 28, 2024
    • An in-development R package and a Bayesian hierarchical model jointly fitting multiple "local" wastewater data streams and "global" case count data to produce nowcasts and forecasts of both observations
      R
      Apache License 2.0
      422754Updated Dec 28, 2024Dec 28, 2024
    • A rust crate that automatically cleans up a gene alignment by trimming to ORF and identifying and/or removing problematic sequences.
      Rust
      Apache License 2.0
      1130Updated Dec 28, 2024Dec 28, 2024
    • phdi

      Public
      HTML
      Creative Commons Zero v1.0 Universal
      153523212Updated Dec 28, 2024Dec 28, 2024
    • Python
      Apache License 2.0
      1192Updated Dec 27, 2024Dec 27, 2024
    • Widget: Test-negative study design for estimating vaccine efficacy
      Python
      Apache License 2.0
      0002Updated Dec 27, 2024Dec 27, 2024
    • Rust
      Apache License 2.0
      1113Updated Dec 27, 2024Dec 27, 2024
    • CDC OpenViz is a library of React packages for data visualization.
      TypeScript
      Apache License 2.0
      213607Updated Dec 27, 2024Dec 27, 2024
    • A FHIR client allowing public health agencies to query health care organizations directly or via a TEFCA QHIN
      TypeScript
      Creative Commons Zero v1.0 Universal
      14417Updated Dec 27, 2024Dec 27, 2024
    • A repository run by the US CDC to collect forecasts of weekly incident COVID-19 hospital admissions.
      R
      Apache License 2.0
      118113Updated Dec 27, 2024Dec 27, 2024
    • The Public Health Data Observability (PHDO) Processing Status API (PS API) was developed to provide visibility into the status and performance of file uploads. The PS API provides the ability to receive reports about the status of uploads, and to develop custom queries to ask detailed questions about the data being uploaded and processed.
      Kotlin
      Apache License 2.0
      1215Updated Dec 27, 2024Dec 27, 2024
    • Intelligent Data Workflow Automation
      TypeScript
      Apache License 2.0
      31412Updated Dec 27, 2024Dec 27, 2024
    • Bringing together healthcare providers by reducing the connection burden.
      Groovy
      Apache License 2.0
      6111514Updated Dec 27, 2024Dec 27, 2024
    • Python
      Apache License 2.0
      00155Updated Dec 27, 2024Dec 27, 2024
    • Python
      Apache License 2.0
      110150Updated Dec 27, 2024Dec 27, 2024
    • This repository is created for NEDSS Helm charts.
      Smarty
      Apache License 2.0
      2205Updated Dec 27, 2024Dec 27, 2024
    • Data Near Real Time Reporting micro services for Modernized NBS System
      TSQL
      Apache License 2.0
      1002Updated Dec 27, 2024Dec 27, 2024
    • R tools for short-term forecasting
      R
      Apache License 2.0
      2380Updated Dec 27, 2024Dec 27, 2024
    • Python
      Apache License 2.0
      1130Updated Dec 26, 2024Dec 26, 2024
    • GitHub Actions by CDC's CFA team
      Python
      1450Updated Dec 26, 2024Dec 26, 2024