chore: use dependency-groups (#2064) #4560

Job	Run time
Linters (mypy, flake8, etc.)	55s
Test cibuildwheel building pyodide wheels	6m 5s
Test on ubuntu-latest (3.13)	45m 18s
Get qemu emulated architectures	7s
Test on windows-latest (3.13)	48m 22s
Test on macos-13 (3.13)	26m 22s
Test on macos-14 (3.13)	13m 32s
Test on ubuntu-latest (3.8)	45m 9s
Test Linux aarch64 using qemu	26m 53s
Test Linux armv7l using qemu	16m 43s
Test Linux ppc64le using qemu	17m 43s
Test Linux s390x using qemu	19m 15s
	4h 26m 24s

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