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Revert "[TheiaCoV ONT and Clearlabs] Update consensus task container … build-documentation #63: Commit f81fdb1 pushed by Michal-Babins
December 19, 2024 18:12 33s main
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December 19, 2024 18:12 33s
[Concatenate_Illumina_Lanes] Fix bug when single-end only (#695) build-documentation #62: Commit 2571a4f pushed by Michal-Babins
December 17, 2024 15:22 38s main
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December 17, 2024 15:22 38s
v2.3.0 final changes (#693) build-documentation #61: Commit 4fbb73e pushed by sage-wright
December 16, 2024 19:40 36s main
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December 16, 2024 19:40 36s
[TheiaProk] Update default versions for TB-Profiler and tbp-parser (#… build-documentation #60: Commit cdd853f pushed by Michal-Babins
December 13, 2024 20:04 34s main
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December 13, 2024 20:04 34s
Merge pull request #686 from theiagen/mb-augur-automodel-output-dev build-documentation #59: Commit 2013e30 pushed by sage-wright
December 11, 2024 19:14 34s main
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December 11, 2024 19:14 34s
[Freyja] Update freyja to version 1.5.2, expose pathogen flag and min… build-documentation #58: Commit e552f80 pushed by Michal-Babins
December 11, 2024 18:51 34s main
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December 11, 2024 18:51 34s
[TheiaCoV] Update nextclade dataset tag for H5N1 to the latest versio… build-documentation #57: Commit 145188b pushed by sage-wright
December 6, 2024 17:04 42s main
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December 6, 2024 17:04 42s
[TheiaCoV] Split database from Kraken2_TheiaCoV task (#670) build-documentation #56: Commit be1247b pushed by Michal-Babins
December 5, 2024 14:40 36s main
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December 5, 2024 14:40 36s
[Documentation] update dataset tags (#681) build-documentation #55: Commit fd1be2e pushed by sage-wright
December 4, 2024 16:56 34s main
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December 4, 2024 16:56 34s
[TheiaCoV] Update nextclade dataset tags and pangolin docker version … build-documentation #54: Commit 4dbcb6f pushed by sage-wright
December 4, 2024 15:44 53s main
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December 4, 2024 15:44 53s
[Documentation] Various updates (#680) build-documentation #53: Commit fec7365 pushed by cimendes
December 4, 2024 15:26 50s main
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December 4, 2024 15:26 50s
Documentation Update (#678) build-documentation #52: Commit 12404d8 pushed by sage-wright
December 3, 2024 15:53 34s main
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December 3, 2024 15:53 34s
[Fetch_SRR_Accession] New wf to retrieve SRR after Terra2NCBI wf (#668) build-documentation #51: Commit b4aad55 pushed by sage-wright
November 26, 2024 15:12 41s main
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November 26, 2024 15:12 41s
[Documentation] Update code contribution guidelines (#675) build-documentation #50: Commit 24b6abe pushed by sage-wright
November 26, 2024 14:44 42s main
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November 26, 2024 14:44 42s
force collection_date to be a string (#658) build-documentation #49: Commit 2bf8822 pushed by sage-wright
November 19, 2024 17:21 36s main
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November 19, 2024 17:21 36s
[Augur] Add augur tree iqtree model type to output (#674) build-documentation #48: Commit ad49a36 pushed by sage-wright
November 14, 2024 19:46 45s main
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November 14, 2024 19:46 45s
Prevent Silent Errors (#666) build-documentation #47: Commit 2669f99 pushed by AndrewLangvt
November 8, 2024 20:35 33s main
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November 8, 2024 20:35 33s
[TheiaCoV/TheiaProk/TheiaMeta/TheiaEuk/Freyja_FASTQ] fastq-scan upd… build-documentation #46: Commit 2fd9f75 pushed by AndrewLangvt
November 8, 2024 19:36 32s main
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November 8, 2024 19:36 32s
Add Snippy_Variants QC outputs to Snippy_Tree and Snippy_Sreamline wo… build-documentation #45: Commit 4bcf3f2 pushed by sage-wright
November 6, 2024 16:59 34s main
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November 6, 2024 16:59 34s
Update MIDAS database documentation in TheiaProk (#667) build-documentation #44: Commit 6566344 pushed by AndrewLangvt
November 5, 2024 17:00 38s main
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November 5, 2024 17:00 38s
[TheiaCov] wfs add percentage_mapped_reads (#641) build-documentation #43: Commit 3dda02c pushed by sage-wright
November 4, 2024 18:36 31s main
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November 4, 2024 18:36 31s
[Mercury] bump mercury docker to 1.0.9: bugfix for GISAID metadata co… build-documentation #42: Commit 34a64fb pushed by sage-wright
November 4, 2024 16:41 2m 51s main
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November 4, 2024 16:41 2m 51s
[TheiaProk] Adds stxtyper to merlin_magic and TheiaProk wfs (#525) build-documentation #41: Commit 3e8c447 pushed by sage-wright
October 24, 2024 20:18 37s main
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October 24, 2024 20:18 37s
type error correction theiacov wf (#660) build-documentation #40: Commit d4f3da8 pushed by AndrewLangvt
October 24, 2024 18:26 37s main
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October 24, 2024 18:26 37s
[MerlinMagic] Fixed output for crypto snippy_variants_num_variants (#… build-documentation #39: Commit 757f316 pushed by sage-wright
October 22, 2024 12:50 31s main
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October 22, 2024 12:50 31s