Fix whitespaces

theiagen · Jul 11, 2021 · a16181a · a16181a
1 parent e75b2c2
commit a16181a
Showing 1 changed file with 3 additions and 3 deletions.
diff --git a/tasks/task_file_handling.wdl b/tasks/task_file_handling.wdl
@@ -128,10 +128,10 @@ task zip_files {
     String? docker_image = "theiagen/utility:1.1"
   }
   command <<<
-    file_array = (~{sep=' ' files_to_zip})
+    file_array=(~{sep=' ' files_to_zip})
     mkdir ~{zipped_file_name}
 
-    # cat files one by one and store them in the concatenated_files file
+    # move files oto a single directory before zipping
     for index in ${!file_array[@]}; do
       file=${file_array[$index]}
       mv ${file} ~{zipped_file_name}
@@ -140,7 +140,7 @@ task zip_files {
     zip -r ~{zipped_file_name}.zip ~{zipped_file_name}
 >>>
   output {
-    File    zipped_files   = "~{zipped_file_name}.zip"
+    File zipped_files = "~{zipped_file_name}.zip"
   }
   runtime {
       docker: "~{docker_image}"