Pipeline for genome scaffolding by modelling distributions of HiC pairs
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Dec 7, 2022 - C
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hic-analysis
Here are 6 public repositories matching this topic...
Configurable Hi-C pipeline that is easy to use
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Aug 21, 2024 - Python
Chromatin loop caller using Topological Data Analysis based on Hi-C data
bioinformatics hi-c chromatin persistent-homology topological-data-analysis bioinformatics-tool chromatin-loops hic-analysis
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Apr 9, 2024 - Python
Code for my Master project
pipeline data-visualization python3 hi-c chromatin-interaction edgelist pre-processing network-biology hic-analysis hic-network-analysis
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Jul 5, 2024 - Python
Topologically Associating Domain optimal set prediction using Armatus software
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Dec 5, 2024 - Python
This repo contains computational analysis performed in Li21.
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May 26, 2022 - Jupyter Notebook
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