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Issues list

Implement General Negative Binomial Distribution
#536 opened Dec 6, 2024 by zjzxiaohei
Fix parent version in pom enhancement New feature or request
#535 opened Oct 24, 2024 by walterxie
1
Add AugmentedAlignment interface enhancement New feature or request
#530 opened Oct 16, 2024 by walterxie
Setup Maven repository in Github critical change the bug fix or new feature will significant change the code enhancement New feature or request
#516 opened Aug 14, 2024 by walterxie
1
Improve Maven test for multiple projects enhancement New feature or request
#513 opened Aug 6, 2024 by walterxie
1
Log variables not being saved correctly
#509 opened Jul 28, 2024 by zjzxiaohei
4
Need validation to all GenerativeDistribution and Function implemented correctly critical change the bug fix or new feature will significant change the code enhancement New feature or request
#502 opened Jul 4, 2024 by walterxie
implement CalibratedYule distribution enhancement New feature or request
#497 opened Jun 18, 2024 by EvaLiyt
2
Aged conditional coalescent enhancement New feature or request
#487 opened Jun 5, 2024 by walterxie
Allow replicates to be a vector critical change the bug fix or new feature will significant change the code enhancement New feature or request
#486 opened Jun 5, 2024 by walterxie
unnecessary logging enhancement New feature or request
#484 opened Jun 4, 2024 by walterxie
Why we need BasicFunction? question Further information is requested
#480 opened May 23, 2024 by walterxie
2
Add ProgressBar enhancement New feature or request
#474 opened May 15, 2024 by walterxie
LPhystudio viewing large alignments causes window to lag
#467 opened May 6, 2024 by kche309
1
Add memory efficient version of ErrorAlignment enhancement New feature or request
#466 opened May 6, 2024 by kche309
Writing large alignment causes out of memory error enhancement New feature or request
#465 opened May 5, 2024 by EvaLiyt
Implement Multinomial distribution enhancement New feature or request
#463 opened Apr 18, 2024 by kche309
merge PopulationFunctionCoalescent to SerialCoalescent enhancement New feature or request
#462 opened Apr 17, 2024 by walterxie
IntelliJ error when opening linguaPhylo project
#459 opened Apr 15, 2024 by kche309
Long numbers should be displayed using scientific notation
#456 opened Apr 9, 2024 by kche309
1
Simplify the SPI framework in lphy critical change the bug fix or new feature will significant change the code enhancement New feature or request
#454 opened Apr 4, 2024 by walterxie
1
Implement Ascertainment Corrections
#450 opened Mar 4, 2024 by SimonGreenhill
2
Create new lphy extension to use beast2 nexus parser enhancement New feature or request
#446 opened Feb 7, 2024 by walterxie
1
Data clamp needs to check if both sequence types are same enhancement New feature or request
#444 opened Feb 7, 2024 by walterxie
1
The design of FileConfig and SimulatorListener needs to change enhancement New feature or request
#433 opened Dec 8, 2023 by walterxie
ProTip! Updated in the last three days: updated:>2024-12-29.